Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.62□□□□□ -1.67
COL2A1P02458 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL2A1P02458 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
COL2A1P02458 DDX18P4-201ENST00000511690 1966 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 HSPD1P11-201ENST00000508643 1702 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL2A1P02458 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.62□□□□□ -1.67
COL2A1P02458 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL2A1P02458 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL2A1P02458 AC023632.6-201ENST00000624338 2177 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 IL6STP1-201ENST00000346911 1020 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 RSL24D1P1-201ENST00000404972 493 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 AC096664.2-201ENST00000411843 406 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.62□□□□□ -1.67
COL2A1P02458 AL591419.1-201ENST00000427423 339 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 OR4F13P-201ENST00000428478 931 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 MTND2P2-201ENST00000434633 945 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 MAPRE1P3-201ENST00000435438 796 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 Z74696.2-201ENST00000436514 498 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 RPL21P11-201ENST00000461458 483 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.62□□□□□ -1.67
COL2A1P02458 RN7SL585P-201ENST00000470538 280 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 RPS26P28-201ENST00000470806 348 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.62□□□□□ -1.67
COL2A1P02458 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.62□□□□□ -1.67
COL2A1P02458 AC008802.1-201ENST00000519121 791 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.62□□□□□ -1.67
COL2A1P02458 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.62□□□□□ -1.67
COL2A1P02458 AC007066.2-202ENST00000566531 914 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 MTND2P13-201ENST00000577438 1039 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 MIR5187-201ENST00000583479 76 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.62□□□□□ -1.67
COL2A1P02458 AP005212.4-201ENST00000614206 710 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 AC138627.1-204ENST00000641894 765 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL2A1P02458 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL2A1P02458 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL2A1P02458 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
COL2A1P02458 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
COL2A1P02458 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.61□□□□□ -1.67
COL2A1P02458 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL2A1P02458 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
COL2A1P02458 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL2A1P02458 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
COL2A1P02458 AL022311.1-201ENST00000623726 19416 ntBASIC4.61□□□□□ -1.67
COL2A1P02458 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.61□□□□□ -1.67
COL2A1P02458 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
COL2A1P02458 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL2A1P02458 RPL21P17-201ENST00000397467 475 ntBASIC4.61□□□□□ -1.67
COL2A1P02458 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.61□□□□□ -1.67
COL2A1P02458 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.61□□□□□ -1.67
COL2A1P02458 RPL7AP73-201ENST00000413490 353 ntBASIC4.61□□□□□ -1.67
COL2A1P02458 AC106901.1-201ENST00000425086 698 ntBASIC4.61□□□□□ -1.67
COL2A1P02458 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.61□□□□□ -1.67
COL2A1P02458 AL451050.1-201ENST00000450126 415 ntBASIC4.61□□□□□ -1.67
COL2A1P02458 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL2A1P02458 RPL7P24-201ENST00000493052 752 ntBASIC4.61□□□□□ -1.67
COL2A1P02458 TPT1P8-201ENST00000510120 555 ntBASIC4.61□□□□□ -1.67
COL2A1P02458 OR8X1P-201ENST00000534542 869 ntBASIC4.61□□□□□ -1.67
COL2A1P02458 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.61□□□□□ -1.67
COL2A1P02458 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL2A1P02458 EIF1AXP2-201ENST00000555940 413 ntBASIC4.61□□□□□ -1.67
COL2A1P02458 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
COL2A1P02458 AC009039.2-201ENST00000624524 529 ntBASIC4.61□□□□□ -1.67
COL2A1P02458 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.61□□□□□ -1.67
COL2A1P02458 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
COL2A1P02458 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.61□□□□□ -1.67
COL2A1P02458 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL2A1P02458 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL2A1P02458 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.6□□□□□ -1.67
COL2A1P02458 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL2A1P02458 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
COL2A1P02458 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.6□□□□□ -1.67
COL2A1P02458 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.6□□□□□ -1.67
COL2A1P02458 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL2A1P02458 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL2A1P02458 SNORA72.3-201ENST00000365074 132 ntBASIC4.6□□□□□ -1.67
COL2A1P02458 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.6□□□□□ -1.67
COL2A1P02458 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
COL2A1P02458 SNORA3.3-201ENST00000408712 125 ntBASIC4.6□□□□□ -1.67
COL2A1P02458 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.6□□□□□ -1.67
COL2A1P02458 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.6□□□□□ -1.67
COL2A1P02458 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
COL2A1P02458 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.6□□□□□ -1.67
COL2A1P02458 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.6□□□□□ -1.67
COL2A1P02458 HMGN2P31-201ENST00000432430 273 ntBASIC4.6□□□□□ -1.67
COL2A1P02458 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.6□□□□□ -1.67
COL2A1P02458 HMGB1P37-201ENST00000439613 609 ntBASIC4.6□□□□□ -1.67
COL2A1P02458 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.6□□□□□ -1.67
COL2A1P02458 MTCYBP11-201ENST00000447254 1109 ntBASIC4.6□□□□□ -1.67
COL2A1P02458 AC104306.1-201ENST00000449702 371 ntBASIC4.6□□□□□ -1.67
COL2A1P02458 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.6□□□□□ -1.67
COL2A1P02458 AC025554.1-201ENST00000505641 188 ntBASIC4.6□□□□□ -1.67
COL2A1P02458 AC074250.1-201ENST00000511117 192 ntBASIC4.6□□□□□ -1.67
COL2A1P02458 RNU1-103P-201ENST00000516502 125 ntBASIC4.6□□□□□ -1.67
COL2A1P02458 RNA5SP164-201ENST00000516533 110 ntBASIC4.6□□□□□ -1.67
COL2A1P02458 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.6□□□□□ -1.67
COL2A1P02458 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.6□□□□□ -1.67
COL2A1P02458 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.6□□□□□ -1.67
COL2A1P02458 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms