Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.09□□□□□ -1.59
PHGDHO43175 AP001642.1-201ENST00000624727 2117 ntBASIC5.09□□□□□ -1.59
PHGDHO43175 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.09□□□□□ -1.6
PHGDHO43175 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
PHGDHO43175 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
PHGDHO43175 ELL2P3-201ENST00000457883 1602 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PHGDHO43175 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PHGDHO43175 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PHGDHO43175 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PHGDHO43175 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PHGDHO43175 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PHGDHO43175 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PHGDHO43175 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PHGDHO43175 PHKBP1-201ENST00000450951 1951 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.08□□□□□ -1.6
PHGDHO43175 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PHGDHO43175 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PHGDHO43175 RNU6-251P-201ENST00000363235 104 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 RNA5SP391-201ENST00000363456 119 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 BMS1P3-201ENST00000372011 932 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 RNU6-178P-201ENST00000384631 104 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 DSTNP4-201ENST00000399472 474 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PHGDHO43175 AC009804.1-201ENST00000400949 179 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 RPL35AP24-201ENST00000413846 330 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.08□□□□□ -1.6
PHGDHO43175 AC062016.2-201ENST00000420950 676 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.08□□□□□ -1.6
PHGDHO43175 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.08□□□□□ -1.6
PHGDHO43175 AL139148.1-201ENST00000427122 680 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 AC104843.2-201ENST00000427666 297 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 RPL34P6-201ENST00000432390 345 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.08□□□□□ -1.6
PHGDHO43175 MTND2P4-201ENST00000445034 1004 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.08□□□□□ -1.6
PHGDHO43175 AC108463.1-201ENST00000450258 347 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.08□□□□□ -1.6
PHGDHO43175 OR52A4P-201ENST00000472867 958 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 SIAH1P1-201ENST00000479411 923 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 AC013828.1-201ENST00000481845 158 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 RPL7P38-201ENST00000488396 739 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 AC104685.1-201ENST00000502445 371 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.08□□□□□ -1.6
PHGDHO43175 RPS4XP20-201ENST00000505751 772 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.08□□□□□ -1.6
PHGDHO43175 HMGB1P28-201ENST00000507778 552 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 HSPE1P23-201ENST00000509838 286 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
PHGDHO43175 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.08□□□□□ -1.6
PHGDHO43175 RNY4P37-201ENST00000516225 96 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.08□□□□□ -1.6
PHGDHO43175 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.08□□□□□ -1.6
PHGDHO43175 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.08□□□□□ -1.6
PHGDHO43175 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.08□□□□□ -1.6
PHGDHO43175 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.08□□□□□ -1.6
PHGDHO43175 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.08□□□□□ -1.6
PHGDHO43175 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.08□□□□□ -1.6
PHGDHO43175 AC074051.3-201ENST00000570238 358 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 AC011840.5-201ENST00000582125 771 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.08□□□□□ -1.6
PHGDHO43175 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.08□□□□□ -1.6
PHGDHO43175 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.08□□□□□ -1.6
PHGDHO43175 AC069307.1-201ENST00000602820 447 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.08□□□□□ -1.6
PHGDHO43175 AC091946.2-201ENST00000606105 291 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 Z95327.3-201ENST00000610385 572 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 AC037198.3-201ENST00000616754 526 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.08□□□□□ -1.6
PHGDHO43175 BX005214.3-202ENST00000619809 325 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.08□□□□□ -1.6
PHGDHO43175 AC135068.12-201ENST00000637370 931 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 AC068137.4-201ENST00000638485 296 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.08□□□□□ -1.6
PHGDHO43175 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.08□□□□□ -1.6
PHGDHO43175 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PHGDHO43175 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.08□□□□□ -1.6
PHGDHO43175 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
PHGDHO43175 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PHGDHO43175 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.08□□□□□ -1.6
PHGDHO43175 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PHGDHO43175 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.08□□□□□ -1.6
PHGDHO43175 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PHGDHO43175 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.07□□□□□ -1.6
PHGDHO43175 AL390862.1-201ENST00000635467 1469 ntBASIC5.07□□□□□ -1.6
PHGDHO43175 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PHGDHO43175 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
PHGDHO43175 AL022322.2-201ENST00000624072 20397 ntBASIC5.07□□□□□ -1.6
PHGDHO43175 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PHGDHO43175 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PHGDHO43175 MIR323A-201ENST00000362199 86 ntBASIC5.07□□□□□ -1.6
PHGDHO43175 FABP12P1-201ENST00000401911 322 ntBASIC5.07□□□□□ -1.6
PHGDHO43175 MIR1284-201ENST00000408337 120 ntBASIC5.07□□□□□ -1.6
PHGDHO43175 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PHGDHO43175 RN7SKP293-201ENST00000411389 296 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms