Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC034236.1-201ENST00000469891 373 ntBASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 TRBV8-1-201ENST00000481590 279 ntBASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 PAICSP4-201ENST00000517543 1253 ntBASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 KCTD9P6-201ENST00000522306 950 ntBASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 SNORA35B-201ENST00000607417 129 ntBASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TMX2-CTNND1H3BSU7 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 OR11H5P-202ENST00000641612 1325 ntBASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC097504.1-201ENST00000515103 2415 ntBASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 RAC1P3-201ENST00000416129 580 ntBASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 AL590609.2-201ENST00000421430 368 ntBASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 AL356276.2-201ENST00000435919 558 ntBASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 ABCF2P2-201ENST00000450549 296 ntBASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 AP002371.1-201ENST00000463604 433 ntBASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 RNU4-18P-201ENST00000516751 149 ntBASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC141257.3-201ENST00000572906 215 ntBASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 MIR5685-201ENST00000579080 79 ntBASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 MIR4444-1-201ENST00000581696 74 ntBASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 MIR4444-2-201ENST00000584390 74 ntBASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC020658.4-201ENST00000613987 684 ntBASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC106871.1-201ENST00000568324 3102 ntBASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC008725.1-201ENST00000605123 2263 ntBASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 RNU1-89P-201ENST00000384592 164 ntBASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 MIR670-201ENST00000390142 98 ntBASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 RNU6-1320P-201ENST00000390838 107 ntBASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 RNU6-1269P-201ENST00000391139 107 ntBASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 MIR1911-201ENST00000410783 80 ntBASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 PPIAP17-201ENST00000438507 471 ntBASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 RSL24D1P2-201ENST00000445584 366 ntBASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 HMGB1P16-201ENST00000447155 540 ntBASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 RNU6-599P-201ENST00000459383 107 ntBASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 RNU6-1193P-201ENST00000459461 107 ntBASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC104849.1-201ENST00000462623 405 ntBASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC007688.1-201ENST00000475592 759 ntBASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 AF213884.1-201ENST00000488102 463 ntBASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 HSPE1P5-201ENST00000561489 272 ntBASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC022655.2-201ENST00000577280 318 ntBASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 AL391597.1-201ENST00000618707 694 ntBASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 RNU6-368P-201ENST00000620928 107 ntBASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 RNU6-538P-201ENST00000622329 107 ntBASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms