Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 AL049779.3-201ENST00000557141 606 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 TPRX1P1-201ENST00000557620 319 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 MIR744-201ENST00000578242 98 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 RNU4ATAC-201ENST00000580972 127 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 AC004853.1-201ENST00000604902 698 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 AC007347.2-201ENST00000623044 180 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 PWAR1-201ENST00000624188 2414 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 AC232271.1-201ENST00000602455 2715 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 SNORD1C-201ENST00000363315 78 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 RNU6-1097P-201ENST00000363586 107 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 MRPS6P2-201ENST00000381143 370 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 Y_RNA.394-201ENST00000383942 103 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 RNU6-1158P-201ENST00000391167 107 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 RNU6-510P-201ENST00000391239 108 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 RNU1-56P-201ENST00000391303 164 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 AC068050.1-201ENST00000394891 380 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 AL354719.1-201ENST00000406535 843 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 ZNF37CP-201ENST00000406795 241 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 SNORA77.2-201ENST00000408571 112 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 RN7SKP91-201ENST00000410852 288 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 RN7SKP17-201ENST00000411242 351 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 AL354868.1-201ENST00000417077 482 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 MTND2P23-201ENST00000422990 651 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 AC013403.1-201ENST00000436954 263 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 MRPL50P4-201ENST00000446432 475 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 TCEA1P1-201ENST00000449716 880 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 RPL31P15-201ENST00000449770 338 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 APOOP2-201ENST00000461561 539 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 RPL7AP10-201ENST00000481016 791 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 AC010587.1-201ENST00000505809 469 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 PCBP2P3-201ENST00000509726 843 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 RNU6-277P-201ENST00000516272 106 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 RN7SL131P-201ENST00000579043 256 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 AL353997.4-201ENST00000586196 166 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 AC243654.2-201ENST00000612843 443 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 MIR6085-201ENST00000618314 110 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 TPTEP1-208ENST00000636884 213 ntBASIC5.42□□□□□ -1.54
SHISA3A0PJX4 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
SHISA3A0PJX4 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms