Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 RNU6-603P-201ENST00000411403 107 ntBASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 ELOCP19-201ENST00000411919 318 ntBASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 SNRPFP1-201ENST00000414761 252 ntBASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 VPS26BP1-201ENST00000417155 755 ntBASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 DEFB130D-201ENST00000426866 237 ntBASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 RPS20P1-201ENST00000434853 354 ntBASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 FABP5P3-201ENST00000437960 408 ntBASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 ELOCP13-201ENST00000443934 329 ntBASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 AC069540.1-201ENST00000446320 988 ntBASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 AC012671.1-201ENST00000451912 203 ntBASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 AC108471.1-201ENST00000513977 287 ntBASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 AC068831.4-201ENST00000556118 109 ntBASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 MIR4277-201ENST00000578298 84 ntBASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 AC091178.1-203ENST00000584586 279 ntBASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 AL160237.3-201ENST00000604114 1013 ntBASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 AC090948.2-201ENST00000607363 564 ntBASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 AC006963.1-201ENST00000624003 1052 ntBASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 AC067931.1-201ENST00000624190 671 ntBASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 MAPK10-320ENST00000641462 6696 ntBASIC4.82□□□□□ -1.64
SNX9Q9Y5X1 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AC139713.2-215ENST00000641428 5037 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 ATP5F1P2-201ENST00000398143 760 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 RPL23AP59-201ENST00000399415 461 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 ZNF602P-201ENST00000405929 924 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 TMSB10P2-201ENST00000416049 131 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AC008173.1-201ENST00000418901 264 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AC023128.2-201ENST00000420880 1223 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AL356387.2-201ENST00000422272 243 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 RPS12P5-201ENST00000423449 371 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 GTF2IP2-201ENST00000424290 697 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AL732292.1-201ENST00000426692 226 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AC016712.1-201ENST00000431088 378 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AC000041.1-201ENST00000439655 175 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 RPL6P5-201ENST00000445678 828 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 Z95152.1-201ENST00000453556 656 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AL445433.1-201ENST00000457507 257 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 APOOP2-201ENST00000461561 539 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 RPL23AP37-201ENST00000479658 549 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AC107398.1-201ENST00000486904 505 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 RPS4XP18-201ENST00000495480 763 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 RNU6-276P-201ENST00000516114 96 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AC091163.3-201ENST00000518269 1144 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AC009643.1-201ENST00000532030 391 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AC010735.1-201ENST00000567305 1026 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 BPIFA4P-203ENST00000603168 689 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AC010200.2-201ENST00000605098 235 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AL356218.2-201ENST00000605264 187 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AC008966.2-201ENST00000606157 453 ntBASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.81□□□□□ -1.64
SNX9Q9Y5X1 AC093673.2-201ENST00000609674 331 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms