Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 ACTR3BP3-201ENST00000565577 979 ntBASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 AC068020.1-201ENST00000594215 661 ntBASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 AL031985.2-201ENST00000600955 480 ntBASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 AC130352.1-201ENST00000602979 661 ntBASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 AP001981.2-201ENST00000603241 418 ntBASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 AC107304.1-201ENST00000604229 296 ntBASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 AC010738.1-201ENST00000604970 987 ntBASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 RNU4-75P-201ENST00000364621 146 ntBASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 OR1L6-202ENST00000373684 1044 ntBASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 RNU6-157P-201ENST00000383957 107 ntBASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 Y_RNA.465-201ENST00000384293 102 ntBASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 SNORA40.2-201ENST00000390847 128 ntBASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 AL390316.1-201ENST00000406279 553 ntBASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 AC010385.1-201ENST00000412374 256 ntBASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 MTCO3P41-201ENST00000414801 328 ntBASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 LINC01881-201ENST00000416103 412 ntBASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 TAF13P2-201ENST00000416876 286 ntBASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 AC009784.1-201ENST00000426484 460 ntBASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 HSPD1P12-201ENST00000429127 1069 ntBASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 FABP7P2-201ENST00000429946 379 ntBASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 RHOT1P3-201ENST00000436571 331 ntBASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 MTND2P40-201ENST00000436718 841 ntBASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 NDUFA12P1-201ENST00000455914 406 ntBASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 BTF3P13-201ENST00000513224 490 ntBASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 ZDHHC20P3-201ENST00000531576 336 ntBASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 AADACP1-206ENST00000561502 1193 ntBASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 AP000811.1-201ENST00000603803 651 ntBASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 MEMO1P5-201ENST00000604810 406 ntBASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 AL392112.1-201ENST00000605115 829 ntBASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 RN7SKP299-201ENST00000606679 301 ntBASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 AP000254.1-201ENST00000609934 520 ntBASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 AC073114.1-201ENST00000612027 490 ntBASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.86□□□□□ -1.47
CTDP1Q9Y5B0 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 SMG1P4-204ENST00000523028 4131 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 MTND4P34-201ENST00000572715 1371 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 SNORA2.3-201ENST00000383920 135 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 RNA5SP187-201ENST00000384400 119 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 AL590084.2-201ENST00000401481 382 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 AL034374.1-201ENST00000406329 351 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 AC022028.1-201ENST00000412054 408 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 HMGB3P31-201ENST00000413333 595 ntBASIC5.85□□□□□ -1.47
CTDP1Q9Y5B0 AL590609.2-201ENST00000421430 368 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms