Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 SRIP3-201ENST00000413200 219 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AC126389.1-201ENST00000477436 290 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AC084036.1-201ENST00000609190 508 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AC231759.1-201ENST00000616455 597 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AC139713.2-210ENST00000641741 992 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AP000641.1-201ENST00000531988 1639 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 CCDC162P-202ENST00000368966 6751 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 Y_RNA.338-201ENST00000365320 114 ntBASIC1.56□□□□□ -2.16
MACF1Q9UPN3 RPL7P60-201ENST00000397636 735 ntBASIC1.56□□□□□ -2.16
MACF1Q9UPN3 EIF1P3-201ENST00000423841 334 ntBASIC1.56□□□□□ -2.16
MACF1Q9UPN3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 EEF1B2P7-201ENST00000451177 676 ntBASIC1.56□□□□□ -2.16
MACF1Q9UPN3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 HMGN2P7-201ENST00000456186 273 ntBASIC1.56□□□□□ -2.16
MACF1Q9UPN3 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 UBL5P2-201ENST00000583788 219 ntBASIC1.56□□□□□ -2.16
MACF1Q9UPN3 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 RPS3AP26-201ENST00000398259 784 ntBASIC1.56□□□□□ -2.16
MACF1Q9UPN3 AL138885.1-201ENST00000405921 675 ntBASIC1.56□□□□□ -2.16
MACF1Q9UPN3 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 snoU13.15-201ENST00000459407 104 ntBASIC1.56□□□□□ -2.16
MACF1Q9UPN3 AC010468.1-201ENST00000461022 817 ntBASIC1.56□□□□□ -2.16
MACF1Q9UPN3 AC006511.1-201ENST00000470614 315 ntBASIC1.56□□□□□ -2.16
MACF1Q9UPN3 DEFB122-202ENST00000569013 197 ntBASIC1.56□□□□□ -2.16
MACF1Q9UPN3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 IGHV3-29-201ENST00000604817 344 ntBASIC1.56□□□□□ -2.16
MACF1Q9UPN3 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 Y_RNA.112-201ENST00000363250 102 ntBASIC1.56□□□□□ -2.16
MACF1Q9UPN3 MIR184-201ENST00000384962 84 ntBASIC1.56□□□□□ -2.16
MACF1Q9UPN3 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 UNC5C-201ENST00000453304 9875 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 Z95114.1-201ENST00000624264 14574 ntBASIC1.56□□□□□ -2.16
MACF1Q9UPN3 NXPH1-205ENST00000602349 1953 ntBASIC1.56□□□□□ -2.16
MACF1Q9UPN3 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 AC007342.7-201ENST00000624610 2337 ntBASIC1.56□□□□□ -2.16
MACF1Q9UPN3 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 CKS1BP1-201ENST00000555221 240 ntBASIC1.56□□□□□ -2.16
MACF1Q9UPN3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 SYT14P1-202ENST00000600441 1448 ntBASIC1.56□□□□□ -2.16
MACF1Q9UPN3 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC1.56□□□□□ -2.16
MACF1Q9UPN3 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms