Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 OR8R1P-201ENST00000543943 764 ntBASIC4.96□□□□□ -1.62
CTNNA3Q9UI47 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.96□□□□□ -1.62
CTNNA3Q9UI47 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.96□□□□□ -1.62
CTNNA3Q9UI47 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.96□□□□□ -1.62
CTNNA3Q9UI47 AC025884.1-201ENST00000556034 378 ntBASIC4.96□□□□□ -1.62
CTNNA3Q9UI47 AC084757.1-201ENST00000559987 490 ntBASIC4.96□□□□□ -1.62
CTNNA3Q9UI47 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.96□□□□□ -1.62
CTNNA3Q9UI47 MIR4429-201ENST00000580105 73 ntBASIC4.96□□□□□ -1.62
CTNNA3Q9UI47 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.96□□□□□ -1.62
CTNNA3Q9UI47 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.96□□□□□ -1.62
CTNNA3Q9UI47 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CTNNA3Q9UI47 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTNNA3Q9UI47 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CTNNA3Q9UI47 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
CTNNA3Q9UI47 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.96□□□□□ -1.62
CTNNA3Q9UI47 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CTNNA3Q9UI47 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.96□□□□□ -1.62
CTNNA3Q9UI47 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CTNNA3Q9UI47 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 ELOCP8-201ENST00000439309 332 ntBASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 ELOCP15-201ENST00000442090 332 ntBASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 AL133477.1-201ENST00000457472 514 ntBASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 RPS7P7-201ENST00000463499 571 ntBASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 SEPT7P6-201ENST00000469999 1143 ntBASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 MTCO1P49-201ENST00000523429 802 ntBASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 MIR492-201ENST00000638676 116 ntBASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 ERCC6-202ENST00000374127 1782 ntBASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CTNNA3Q9UI47 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 AL592437.2-201ENST00000421655 2434 ntBASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 RNU6-1279P-201ENST00000383917 103 ntBASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 RPL23AP48-201ENST00000406913 488 ntBASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 RNU6-628P-201ENST00000410675 107 ntBASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 AL391219.1-201ENST00000422570 483 ntBASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 AL138785.1-201ENST00000425821 331 ntBASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 COX6CP15-201ENST00000426313 211 ntBASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 AC073069.1-201ENST00000428657 441 ntBASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 AC006946.1-201ENST00000429106 328 ntBASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 RPL7P1-201ENST00000468161 747 ntBASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 RPL7P9-201ENST00000468715 747 ntBASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 IGLVIV-53-201ENST00000520107 367 ntBASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 AC110743.1-201ENST00000584870 478 ntBASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 FAM60CP-201ENST00000591086 664 ntBASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 AC009318.3-201ENST00000616916 503 ntBASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 AC000123.2-201ENST00000623124 461 ntBASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 AL359715.5-201ENST00000623431 443 ntBASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 RNA5SP196-201ENST00000625967 102 ntBASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 MIR6715B-201ENST00000637172 77 ntBASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CTNNA3Q9UI47 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 AL022722.2-201ENST00000402519 180 ntBASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 AC108032.1-201ENST00000416706 207 ntBASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 AC006011.1-201ENST00000442758 349 ntBASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 AC239809.1-201ENST00000450470 217 ntBASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 HMGB3P22-202ENST00000451823 572 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms