Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4□□□□□ -1.77
CTSFQ9UBX1 RN7SL600P-201ENST00000581811 299 ntBASIC4□□□□□ -1.77
CTSFQ9UBX1 VN1R79P-201ENST00000593540 513 ntBASIC4□□□□□ -1.77
CTSFQ9UBX1 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4□□□□□ -1.77
CTSFQ9UBX1 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4□□□□□ -1.77
CTSFQ9UBX1 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CTSFQ9UBX1 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CTSFQ9UBX1 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4□□□□□ -1.77
CTSFQ9UBX1 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 AC138393.1-206ENST00000540997 1886 ntBASIC3.99□□□□□ -1.77
CTSFQ9UBX1 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 Y_RNA.126-201ENST00000363382 111 ntBASIC3.99□□□□□ -1.77
CTSFQ9UBX1 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 SNORD66.1-201ENST00000391230 76 ntBASIC3.99□□□□□ -1.77
CTSFQ9UBX1 RN7SKP182-201ENST00000410772 298 ntBASIC3.99□□□□□ -1.77
CTSFQ9UBX1 RN7SKP263-201ENST00000411194 309 ntBASIC3.99□□□□□ -1.77
CTSFQ9UBX1 AC013404.1-201ENST00000413068 249 ntBASIC3.99□□□□□ -1.77
CTSFQ9UBX1 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 CYP4F29P-201ENST00000420685 446 ntBASIC3.99□□□□□ -1.77
CTSFQ9UBX1 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 AL392003.1-201ENST00000434394 243 ntBASIC3.99□□□□□ -1.77
CTSFQ9UBX1 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 AL133477.1-201ENST00000457472 514 ntBASIC3.99□□□□□ -1.77
CTSFQ9UBX1 RPS29P19-201ENST00000479709 171 ntBASIC3.99□□□□□ -1.77
CTSFQ9UBX1 AF213884.1-201ENST00000488102 463 ntBASIC3.99□□□□□ -1.77
CTSFQ9UBX1 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 AC147055.1-201ENST00000509261 750 ntBASIC3.99□□□□□ -1.77
CTSFQ9UBX1 FTH1P9-201ENST00000513251 355 ntBASIC3.99□□□□□ -1.77
CTSFQ9UBX1 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.99□□□□□ -1.77
CTSFQ9UBX1 AC099522.1-202ENST00000514718 367 ntBASIC3.99□□□□□ -1.77
CTSFQ9UBX1 RNA5SP73-201ENST00000516744 108 ntBASIC3.99□□□□□ -1.77
CTSFQ9UBX1 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 AC105233.3-201ENST00000531125 744 ntBASIC3.99□□□□□ -1.77
CTSFQ9UBX1 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 AC027281.1-201ENST00000574178 758 ntBASIC3.99□□□□□ -1.77
CTSFQ9UBX1 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 AC006116.5-201ENST00000591936 559 ntBASIC3.99□□□□□ -1.77
CTSFQ9UBX1 AC010680.4-201ENST00000605334 543 ntBASIC3.99□□□□□ -1.77
CTSFQ9UBX1 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 AC243654.2-201ENST00000612843 443 ntBASIC3.99□□□□□ -1.77
CTSFQ9UBX1 uc_338.32-201ENST00000615087 172 ntBASIC3.99□□□□□ -1.77
CTSFQ9UBX1 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 AC107905.1-201ENST00000616204 426 ntBASIC3.99□□□□□ -1.77
CTSFQ9UBX1 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 AL590410.1-201ENST00000617925 333 ntBASIC3.99□□□□□ -1.77
CTSFQ9UBX1 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 AC004943.3-201ENST00000624116 600 ntBASIC3.99□□□□□ -1.77
CTSFQ9UBX1 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CTSFQ9UBX1 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CTSFQ9UBX1 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.98□□□□□ -1.77
CTSFQ9UBX1 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.98□□□□□ -1.77
CTSFQ9UBX1 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTSFQ9UBX1 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CTSFQ9UBX1 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.98□□□□□ -1.77
CTSFQ9UBX1 SPRR2C-201ENST00000290702 219 ntBASIC3.98□□□□□ -1.77
CTSFQ9UBX1 AC007685.1-201ENST00000329806 452 ntBASIC3.98□□□□□ -1.77
CTSFQ9UBX1 RNU6-666P-201ENST00000363499 107 ntBASIC3.98□□□□□ -1.77
CTSFQ9UBX1 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTSFQ9UBX1 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTSFQ9UBX1 RN7SKP33-201ENST00000410942 340 ntBASIC3.98□□□□□ -1.77
CTSFQ9UBX1 CASKP1-201ENST00000412870 582 ntBASIC3.98□□□□□ -1.77
CTSFQ9UBX1 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.98□□□□□ -1.77
CTSFQ9UBX1 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.98□□□□□ -1.77
CTSFQ9UBX1 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.98□□□□□ -1.77
CTSFQ9UBX1 RPL7P28-201ENST00000437739 740 ntBASIC3.98□□□□□ -1.77
CTSFQ9UBX1 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.98□□□□□ -1.77
CTSFQ9UBX1 AC104164.2-201ENST00000496953 495 ntBASIC3.98□□□□□ -1.77
CTSFQ9UBX1 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.98□□□□□ -1.77
CTSFQ9UBX1 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.98□□□□□ -1.77
CTSFQ9UBX1 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CTSFQ9UBX1 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.98□□□□□ -1.77
CTSFQ9UBX1 AC026402.1-201ENST00000513642 170 ntBASIC3.98□□□□□ -1.77
CTSFQ9UBX1 MIR2116-201ENST00000517221 80 ntBASIC3.98□□□□□ -1.77
CTSFQ9UBX1 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.98□□□□□ -1.77
CTSFQ9UBX1 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.98□□□□□ -1.77
CTSFQ9UBX1 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CTSFQ9UBX1 RFPL1S-203ENST00000539579 330 ntBASIC3.98□□□□□ -1.77
CTSFQ9UBX1 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.98□□□□□ -1.77
CTSFQ9UBX1 AC084824.1-201ENST00000550917 1005 ntBASIC3.98□□□□□ -1.77
CTSFQ9UBX1 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.98□□□□□ -1.77
CTSFQ9UBX1 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.98□□□□□ -1.77
CTSFQ9UBX1 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.98□□□□□ -1.77
CTSFQ9UBX1 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.98□□□□□ -1.77
CTSFQ9UBX1 AL713922.2-201ENST00000619384 716 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms