Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.49□□□□□ -1.37
CNTN3Q9P232 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.49□□□□□ -1.37
CNTN3Q9P232 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CNTN3Q9P232 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.49□□□□□ -1.37
CNTN3Q9P232 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CNTN3Q9P232 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CNTN3Q9P232 AL034546.1-201ENST00000623740 3693 ntBASIC6.49□□□□□ -1.37
CNTN3Q9P232 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.49□□□□□ -1.37
CNTN3Q9P232 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CNTN3Q9P232 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CNTN3Q9P232 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CNTN3Q9P232 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CNTN3Q9P232 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CNTN3Q9P232 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CNTN3Q9P232 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 SELENOWP1-201ENST00000322792 252 ntBASIC6.48□□□□□ -1.37
CNTN3Q9P232 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CNTN3Q9P232 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 SNRPEP6-201ENST00000407465 277 ntBASIC6.48□□□□□ -1.37
CNTN3Q9P232 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 RPS27AP6-201ENST00000427962 448 ntBASIC6.48□□□□□ -1.37
CNTN3Q9P232 AC005534.2-201ENST00000431047 433 ntBASIC6.48□□□□□ -1.37
CNTN3Q9P232 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.48□□□□□ -1.37
CNTN3Q9P232 NDUFA5P4-201ENST00000436704 385 ntBASIC6.48□□□□□ -1.37
CNTN3Q9P232 RPL23AP16-201ENST00000441715 421 ntBASIC6.48□□□□□ -1.37
CNTN3Q9P232 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 AC132479.1-201ENST00000449160 144 ntBASIC6.48□□□□□ -1.37
CNTN3Q9P232 ACA64.1-201ENST00000459171 127 ntBASIC6.48□□□□□ -1.37
CNTN3Q9P232 AC104164.1-201ENST00000460282 590 ntBASIC6.48□□□□□ -1.37
CNTN3Q9P232 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.48□□□□□ -1.37
CNTN3Q9P232 MTND1P3-201ENST00000484956 952 ntBASIC6.48□□□□□ -1.37
CNTN3Q9P232 RPL23AP40-201ENST00000487630 390 ntBASIC6.48□□□□□ -1.37
CNTN3Q9P232 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 AP001836.1-201ENST00000604675 523 ntBASIC6.48□□□□□ -1.37
CNTN3Q9P232 AL035413.2-201ENST00000604801 525 ntBASIC6.48□□□□□ -1.37
CNTN3Q9P232 AC090948.2-201ENST00000607363 564 ntBASIC6.48□□□□□ -1.37
CNTN3Q9P232 AL021918.2-201ENST00000613415 194 ntBASIC6.48□□□□□ -1.37
CNTN3Q9P232 AL352984.2-202ENST00000613699 155 ntBASIC6.48□□□□□ -1.37
CNTN3Q9P232 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 AL606537.1-201ENST00000607258 2011 ntBASIC6.48□□□□□ -1.37
CNTN3Q9P232 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CNTN3Q9P232 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CNTN3Q9P232 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CNTN3Q9P232 AC097461.1-201ENST00000568928 2821 ntBASIC6.48□□□□□ -1.37
CNTN3Q9P232 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CNTN3Q9P232 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CNTN3Q9P232 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC6.48□□□□□ -1.37
CNTN3Q9P232 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CNTN3Q9P232 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
CNTN3Q9P232 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CNTN3Q9P232 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CNTN3Q9P232 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CNTN3Q9P232 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.47□□□□□ -1.37
CNTN3Q9P232 AC092724.1-201ENST00000624623 3397 ntBASIC6.47□□□□□ -1.37
CNTN3Q9P232 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
CNTN3Q9P232 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CNTN3Q9P232 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CNTN3Q9P232 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CNTN3Q9P232 AC016739.1-201ENST00000405359 345 ntBASIC6.47□□□□□ -1.37
CNTN3Q9P232 JKAMPP1-201ENST00000413804 919 ntBASIC6.47□□□□□ -1.37
CNTN3Q9P232 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.47□□□□□ -1.37
CNTN3Q9P232 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.47□□□□□ -1.37
CNTN3Q9P232 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.47□□□□□ -1.37
CNTN3Q9P232 RPS17P17-201ENST00000419392 409 ntBASIC6.47□□□□□ -1.37
CNTN3Q9P232 AL035660.1-201ENST00000422041 222 ntBASIC6.47□□□□□ -1.37
CNTN3Q9P232 AC233981.1-201ENST00000423224 461 ntBASIC6.47□□□□□ -1.37
CNTN3Q9P232 FTLP19-201ENST00000433300 394 ntBASIC6.47□□□□□ -1.37
CNTN3Q9P232 AL445928.1-201ENST00000435545 222 ntBASIC6.47□□□□□ -1.37
CNTN3Q9P232 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.47□□□□□ -1.37
CNTN3Q9P232 HMGB3P12-201ENST00000438745 556 ntBASIC6.47□□□□□ -1.37
CNTN3Q9P232 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC6.47□□□□□ -1.37
CNTN3Q9P232 CBX1P1-201ENST00000440184 427 ntBASIC6.47□□□□□ -1.37
CNTN3Q9P232 RPS7P3-201ENST00000443360 580 ntBASIC6.47□□□□□ -1.37
CNTN3Q9P232 AC073109.1-201ENST00000445066 978 ntBASIC6.47□□□□□ -1.37
CNTN3Q9P232 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC6.47□□□□□ -1.37
CNTN3Q9P232 AC011476.1-201ENST00000466725 307 ntBASIC6.47□□□□□ -1.37
CNTN3Q9P232 SLC25A51P1-201ENST00000468432 871 ntBASIC6.47□□□□□ -1.37
CNTN3Q9P232 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC6.47□□□□□ -1.37
CNTN3Q9P232 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms