Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 RNU5A-6P-201ENST00000384136 116 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 RNA5SP122-201ENST00000384457 108 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 MIR130A-201ENST00000385274 89 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AL031985.1-201ENST00000392713 418 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 CCNG1P1-201ENST00000406783 885 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 RNA5SP178-201ENST00000410380 128 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 RN7SKP56-201ENST00000410513 331 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AC092745.2-202ENST00000411880 369 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 RPL31P54-201ENST00000429803 370 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 MTCO2P11-201ENST00000431069 680 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 TMEM183AP1-205ENST00000432739 290 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 FTH1P16-201ENST00000435241 552 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 USP9YP8-201ENST00000441913 500 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AC104306.1-201ENST00000449702 371 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 MTND3P10-201ENST00000450967 341 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AC013267.1-201ENST00000458227 267 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 RPS3AP17-201ENST00000472594 777 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 ATP5LP5-201ENST00000483050 299 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AC023424.2-201ENST00000493479 777 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 SETP14-201ENST00000497538 873 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 RNY4P37-201ENST00000516225 96 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AC008802.1-201ENST00000519121 791 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AL049872.1-201ENST00000556323 322 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 MIR4311-201ENST00000580794 100 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 H3F3BP2-201ENST00000583907 357 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AC006272.2-201ENST00000594725 163 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AL117336.2-201ENST00000602435 335 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AC107214.2-201ENST00000608204 634 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AC138649.3-201ENST00000622154 254 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AC091305.2-201ENST00000624049 1576 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 MTCO1P6-201ENST00000481192 1384 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AL590763.1-201ENST00000398297 1545 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AC011933.2-201ENST00000578539 2790 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 LINC01963-201ENST00000562038 3148 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 HMGB1P5-201ENST00000255320 642 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 RPL21P132-201ENST00000331267 462 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 Y_RNA.38-201ENST00000362617 102 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 RNU6-433P-201ENST00000363216 104 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 RNU6-181P-201ENST00000363225 107 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 Y_RNA.450-201ENST00000384198 113 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 FGF7P8-201ENST00000402994 292 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AP000357.1-201ENST00000409926 1165 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AC002504.1-201ENST00000438281 691 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 MTND4LP16-201ENST00000440828 295 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 AC064862.4-201ENST00000442180 334 ntBASIC5.03□□□□□ -1.6
PARPBPQ9NWS1 GDI2P2-201ENST00000445131 608 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms