Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC107982.3-201ENST00000584957 985 ntBASIC4.03□□□□□ -1.76
CISHQ9NSE2 EIF1P6-201ENST00000600054 334 ntBASIC4.03□□□□□ -1.76
CISHQ9NSE2 AL133247.2-201ENST00000603236 482 ntBASIC4.03□□□□□ -1.76
CISHQ9NSE2 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC4.03□□□□□ -1.76
CISHQ9NSE2 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.03□□□□□ -1.76
CISHQ9NSE2 AC091905.1-201ENST00000624400 311 ntBASIC4.03□□□□□ -1.76
CISHQ9NSE2 OR5AC4P-202ENST00000642086 985 ntBASIC4.03□□□□□ -1.76
CISHQ9NSE2 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
CISHQ9NSE2 AL450326.2-201ENST00000421913 1962 ntBASIC4.03□□□□□ -1.76
CISHQ9NSE2 AC024560.2-201ENST00000507981 1497 ntBASIC4.03□□□□□ -1.76
CISHQ9NSE2 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CISHQ9NSE2 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.02□□□□□ -1.77
CISHQ9NSE2 HSPA8P17-201ENST00000427029 1382 ntBASIC4.02□□□□□ -1.77
CISHQ9NSE2 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CISHQ9NSE2 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.02□□□□□ -1.77
CISHQ9NSE2 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CISHQ9NSE2 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CISHQ9NSE2 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CISHQ9NSE2 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CISHQ9NSE2 RPL32P23-201ENST00000397237 405 ntBASIC4.02□□□□□ -1.77
CISHQ9NSE2 AC010740.1-201ENST00000417035 684 ntBASIC4.02□□□□□ -1.77
CISHQ9NSE2 MTND2P15-201ENST00000418575 892 ntBASIC4.02□□□□□ -1.77
CISHQ9NSE2 AL139247.1-201ENST00000422768 325 ntBASIC4.02□□□□□ -1.77
CISHQ9NSE2 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.02□□□□□ -1.77
CISHQ9NSE2 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.02□□□□□ -1.77
CISHQ9NSE2 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.02□□□□□ -1.77
CISHQ9NSE2 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.02□□□□□ -1.77
CISHQ9NSE2 AC146944.2-203ENST00000502493 354 ntBASIC4.02□□□□□ -1.77
CISHQ9NSE2 BTF3L4P4-201ENST00000506381 449 ntBASIC4.02□□□□□ -1.77
CISHQ9NSE2 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CISHQ9NSE2 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.02□□□□□ -1.77
CISHQ9NSE2 AC139495.1-202ENST00000513164 354 ntBASIC4.02□□□□□ -1.77
CISHQ9NSE2 AC026402.1-201ENST00000513642 170 ntBASIC4.02□□□□□ -1.77
CISHQ9NSE2 RN7SKP34-201ENST00000516142 244 ntBASIC4.02□□□□□ -1.77
CISHQ9NSE2 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.02□□□□□ -1.77
CISHQ9NSE2 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.02□□□□□ -1.77
CISHQ9NSE2 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.02□□□□□ -1.77
CISHQ9NSE2 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.02□□□□□ -1.77
CISHQ9NSE2 AC022882.1-201ENST00000532142 501 ntBASIC4.02□□□□□ -1.77
CISHQ9NSE2 DUX4L52-201ENST00000549363 777 ntBASIC4.02□□□□□ -1.77
CISHQ9NSE2 AC106785.1-201ENST00000565935 262 ntBASIC4.02□□□□□ -1.77
CISHQ9NSE2 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CISHQ9NSE2 AP005901.4-201ENST00000577336 569 ntBASIC4.02□□□□□ -1.77
CISHQ9NSE2 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.02□□□□□ -1.77
CISHQ9NSE2 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.02□□□□□ -1.77
CISHQ9NSE2 AL451086.1-201ENST00000605596 223 ntBASIC4.02□□□□□ -1.77
CISHQ9NSE2 BRDTP1-201ENST00000605735 677 ntBASIC4.02□□□□□ -1.77
CISHQ9NSE2 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.02□□□□□ -1.77
CISHQ9NSE2 AL158062.1-201ENST00000619632 745 ntBASIC4.02□□□□□ -1.77
CISHQ9NSE2 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.02□□□□□ -1.77
CISHQ9NSE2 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.02□□□□□ -1.77
CISHQ9NSE2 AC107021.2-201ENST00000567714 2095 ntBASIC4.02□□□□□ -1.77
CISHQ9NSE2 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CISHQ9NSE2 DDX18P3-201ENST00000404856 2007 ntBASIC4.02□□□□□ -1.77
CISHQ9NSE2 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.02□□□□□ -1.77
CISHQ9NSE2 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CISHQ9NSE2 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CISHQ9NSE2 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CISHQ9NSE2 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CISHQ9NSE2 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.01□□□□□ -1.77
CISHQ9NSE2 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.01□□□□□ -1.77
CISHQ9NSE2 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CISHQ9NSE2 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.01□□□□□ -1.77
CISHQ9NSE2 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CISHQ9NSE2 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CISHQ9NSE2 AC073136.2-201ENST00000417282 849 ntBASIC4.01□□□□□ -1.77
CISHQ9NSE2 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CISHQ9NSE2 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.01□□□□□ -1.77
CISHQ9NSE2 HIGD1AP12-201ENST00000427832 281 ntBASIC4.01□□□□□ -1.77
CISHQ9NSE2 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.01□□□□□ -1.77
CISHQ9NSE2 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.01□□□□□ -1.77
CISHQ9NSE2 SETD6P1-201ENST00000444575 317 ntBASIC4.01□□□□□ -1.77
CISHQ9NSE2 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.01□□□□□ -1.77
CISHQ9NSE2 AC006480.1-201ENST00000449887 378 ntBASIC4.01□□□□□ -1.77
CISHQ9NSE2 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.01□□□□□ -1.77
CISHQ9NSE2 HSPE1P22-201ENST00000456856 327 ntBASIC4.01□□□□□ -1.77
CISHQ9NSE2 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.01□□□□□ -1.77
CISHQ9NSE2 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.01□□□□□ -1.77
CISHQ9NSE2 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.01□□□□□ -1.77
CISHQ9NSE2 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.01□□□□□ -1.77
CISHQ9NSE2 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.01□□□□□ -1.77
CISHQ9NSE2 BNIP3P5-201ENST00000562290 498 ntBASIC4.01□□□□□ -1.77
CISHQ9NSE2 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.01□□□□□ -1.77
CISHQ9NSE2 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.01□□□□□ -1.77
CISHQ9NSE2 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.01□□□□□ -1.77
CISHQ9NSE2 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CISHQ9NSE2 AC093535.2-201ENST00000624769 2326 ntBASIC4.01□□□□□ -1.77
CISHQ9NSE2 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CISHQ9NSE2 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CISHQ9NSE2 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CISHQ9NSE2 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CISHQ9NSE2 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CISHQ9NSE2 AC006042.3-201ENST00000454684 1469 ntBASIC4□□□□□ -1.77
CISHQ9NSE2 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4□□□□□ -1.77
CISHQ9NSE2 RNA5SP424-201ENST00000390988 115 ntBASIC4□□□□□ -1.77
CISHQ9NSE2 SEPT7P2-202ENST00000398921 823 ntBASIC4□□□□□ -1.77
CISHQ9NSE2 AL356967.1-201ENST00000406305 431 ntBASIC4□□□□□ -1.77
CISHQ9NSE2 AL512430.2-201ENST00000406786 339 ntBASIC4□□□□□ -1.77
CISHQ9NSE2 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4□□□□□ -1.77
CISHQ9NSE2 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms