Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 AC087045.3-201ENST00000623046 2468 ntBASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 OR52B5P-204ENST00000641744 3467 ntBASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 RNU1-16P-201ENST00000365477 164 ntBASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 SELE-204ENST00000367776 3576 ntTSL 5 BASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 SELE-205ENST00000367777 3576 ntTSL 5 BASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 AL023284.3-201ENST00000407767 334 ntBASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 ALDH7A1P4-201ENST00000412255 178 ntBASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 AC105052.2-201ENST00000434317 794 ntBASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 EIF5AP4-201ENST00000441206 465 ntBASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 AC093166.3-201ENST00000448785 303 ntBASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 RPS15AP1-201ENST00000457423 391 ntBASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 AC068305.1-201ENST00000497406 726 ntBASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 KRT18P54-201ENST00000513396 748 ntBASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 AMZ2P1-203ENST00000565833 850 ntBASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 AC136932.1-201ENST00000574771 208 ntBASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 AC098826.3-201ENST00000603823 466 ntBASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 AC092821.3-202ENST00000641304 2767 ntBASIC11.29□□□□□ -0.6
SCAF1Q9H7N4 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 TMEM75-201ENST00000624314 2165 ntBASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 AC010680.2-201ENST00000603521 2117 ntBASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 TTC3P1-201ENST00000399586 6081 ntBASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 BDP1P-201ENST00000582658 1990 ntBASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 AC011460.1-201ENST00000636268 1834 ntBASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 OR7E11P-202ENST00000642027 1491 ntBASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 Y_RNA.292-201ENST00000364904 97 ntBASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 SNORD15A-201ENST00000384214 148 ntBASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 SNORA16.2-201ENST00000390991 127 ntBASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 SETP20-201ENST00000457046 852 ntBASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 AC008620.1-201ENST00000468453 592 ntBASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 RN7SL864P-201ENST00000493457 285 ntBASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 NACAP6-201ENST00000509572 622 ntBASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 IGLJCOR18-201ENST00000584002 424 ntBASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 AC093227.2-201ENST00000589357 285 ntBASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 ZNF658B-201ENST00000602828 3408 ntBASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 MAPK10-323ENST00000641493 3207 ntBASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SCAF1Q9H7N4 MAMDC2-AS1-204ENST00000448377 1923 ntTSL 5 BASIC11.27□□□□□ -0.6
SCAF1Q9H7N4 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SCAF1Q9H7N4 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SCAF1Q9H7N4 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SCAF1Q9H7N4 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
SCAF1Q9H7N4 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC11.27□□□□□ -0.6
SCAF1Q9H7N4 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 OSBPL6-202ENST00000315022 2999 ntTSL 2 BASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 RNU6-28P-201ENST00000362378 107 ntBASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 Y_RNA.272-201ENST00000364696 102 ntBASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 MIR191-201ENST00000384873 92 ntBASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 RNU6-918P-201ENST00000391219 106 ntBASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 AL353754.1-201ENST00000440219 340 ntBASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 RNU7-167P-201ENST00000459160 62 ntBASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 CYCTP-201ENST00000504253 315 ntBASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 AC092436.3-201ENST00000511788 257 ntBASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 RNU4-57P-201ENST00000515980 135 ntBASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 RNU6-202P-201ENST00000515998 96 ntBASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 IGHVII-60-1-201ENST00000519079 256 ntBASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 AC107958.1-201ENST00000556576 290 ntBASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms