Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC004486.1-201ENST00000546846 233 ntBASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 DDIT3-202ENST00000547303 872 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 AC106028.1-201ENST00000554322 526 ntBASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 FAM181A-AS1-204ENST00000556290 526 ntTSL 4 BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 AC006441.2-201ENST00000580084 302 ntBASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 ZNF223-202ENST00000585552 541 ntTSL 4 BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 Y_RNA.773-201ENST00000607168 90 ntBASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 AC100827.5-201ENST00000615883 426 ntBASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 Metazoa_SRP.76-201ENST00000619429 290 ntBASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 FAM231C-201ENST00000624031 510 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 MIR376A2-201ENST00000636782 80 ntBASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 HIF3A-205ENST00000377670 5852 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 AC122713.2-201ENST00000624942 3335 ntBASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 FN1-211ENST00000443816 7762 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 SF3A3-201ENST00000373019 3673 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 NTRK2-204ENST00000359847 6646 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 DMP1-202ENST00000339673 2682 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 AFAP1L2-201ENST00000304129 3705 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 MAPKBP1-202ENST00000457542 7232 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 TTC14-201ENST00000296015 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 FTSJ3-201ENST00000427159 3559 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 DNAJC16-203ENST00000375849 3446 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 ZNF778-201ENST00000306502 2386 ntTSL 2 BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 SMC1B-202ENST00000404354 3636 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 PGK1-201ENST00000373316 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 AC005332.9-201ENST00000620266 2921 ntBASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 KCTD7-207ENST00000639879 5098 ntTSL 4 BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 ZBTB43-202ENST00000373464 5965 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 CYBRD1-201ENST00000321348 4365 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 SEMA4D-208ENST00000422704 4382 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 AC078795.1-201ENST00000602342 3143 ntBASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 SNX19P2-201ENST00000452841 2971 ntBASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 CTNND2-205ENST00000503622 2982 ntTSL 2 BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP3-3Q9BYR6 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 IGF1R-201ENST00000268035 11803 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 FAM13C-214ENST00000611933 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 SEC22B-201ENST00000578049 6922 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 GPR89A-201ENST00000313835 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 ZNF611-219ENST00000602162 3299 ntTSL 2 BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 CTNNA2-203ENST00000402739 3684 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 MAPK10-386ENST00000642038 2354 ntBASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 NOL8P1-201ENST00000508336 3529 ntBASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 SASH1-204ENST00000622663 5075 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 MYO7B-201ENST00000409090 3567 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 FLII-215ENST00000545457 3975 ntTSL 2 BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 TMEM178B-202ENST00000565468 10558 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 TMEM178B-203ENST00000610315 10552 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 OGDH-201ENST00000222673 4181 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 AC110079.1-201ENST00000567913 4395 ntTSL 5 BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 AC092683.1-204ENST00000610408 2830 ntTSL 2 BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 AC159540.2-202ENST00000613749 2830 ntTSL 2 BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 GPR26-201ENST00000284674 7514 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 AMBRA1-202ENST00000458649 5351 ntTSL 2 BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 WNK1-204ENST00000530271 11804 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 GANAB-202ENST00000356638 3608 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 OR51A10P-201ENST00000307165 937 ntBASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 Y_RNA.57-201ENST00000362806 113 ntBASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 RNU6-173P-201ENST00000364215 104 ntBASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 PDZK1IP1-202ENST00000371885 770 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 DEFA1B-201ENST00000382689 491 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 RNU6-800P-201ENST00000384473 103 ntBASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 RNU6-679P-201ENST00000391003 106 ntBASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 RNU6-837P-201ENST00000391056 108 ntBASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 MIR1185-2-201ENST00000408687 86 ntBASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 AC245052.2-201ENST00000413723 327 ntBASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 FAM197Y10-201ENST00000425318 520 ntBASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 AC009362.1-201ENST00000427253 406 ntBASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 AL831784.1-201ENST00000427302 373 ntTSL 2 BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 LINC02521-201ENST00000440848 834 ntTSL 2 BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 AC104333.3-201ENST00000449334 479 ntBASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 BX323845.2-201ENST00000458382 234 ntBASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 AC006978.1-201ENST00000496846 1234 ntBASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 AIG1P1-201ENST00000503376 148 ntBASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 RNU6-63P-201ENST00000516690 95 ntBASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 AC136443.1-201ENST00000526173 355 ntBASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 MPPE1P1-201ENST00000557286 1076 ntBASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 AL023803.1-201ENST00000570096 187 ntBASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 AC020908.1-201ENST00000598893 280 ntTSL 3 BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 ZNF430-206ENST00000599548 595 ntTSL 5 BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 SQSTM1P1-201ENST00000603451 859 ntBASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 AC129492.5-201ENST00000603489 315 ntBASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 AC073218.2-201ENST00000606468 295 ntTSL 5 BASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 AC137803.1-201ENST00000611162 263 ntBASIC4.91□□□□□ -1.62
KRTAP3-3Q9BYR6 PCGEM1.1-201ENST00000613431 131 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms