Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.81□□□□□ -1.48
RTFDC1Q9BY42 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.81□□□□□ -1.48
RTFDC1Q9BY42 OR4U1P-201ENST00000554958 912 ntBASIC5.81□□□□□ -1.48
RTFDC1Q9BY42 MTND3P13-201ENST00000574391 343 ntBASIC5.81□□□□□ -1.48
RTFDC1Q9BY42 SNORA74C-1-201ENST00000580726 201 ntBASIC5.81□□□□□ -1.48
RTFDC1Q9BY42 AC069366.1-201ENST00000583159 838 ntBASIC5.81□□□□□ -1.48
RTFDC1Q9BY42 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.81□□□□□ -1.48
RTFDC1Q9BY42 AP000255.1-201ENST00000610276 676 ntBASIC5.81□□□□□ -1.48
RTFDC1Q9BY42 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.81□□□□□ -1.48
RTFDC1Q9BY42 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
RTFDC1Q9BY42 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RTFDC1Q9BY42 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RTFDC1Q9BY42 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RTFDC1Q9BY42 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RTFDC1Q9BY42 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 AL591848.1-201ENST00000413092 322 ntBASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 DPRXP1-201ENST00000426312 460 ntBASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 MTCYBP31-201ENST00000438855 1122 ntBASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 AC091153.1-201ENST00000466297 402 ntBASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 RPL36AP41-201ENST00000493820 306 ntBASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 AC008885.2-201ENST00000509506 930 ntBASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 AC139103.1-201ENST00000534696 1030 ntBASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 AC009097.3-201ENST00000563557 1018 ntBASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 MIR3912-201ENST00000577566 105 ntBASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 AC022662.1-201ENST00000580252 331 ntBASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 MIR3939-201ENST00000582614 106 ntBASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 MIR3138-201ENST00000585238 82 ntBASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 AP001269.3-201ENST00000588718 329 ntBASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 PCNAP1-202ENST00000595299 752 ntBASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 AC007349.4-201ENST00000608114 532 ntBASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 AP004247.3-201ENST00000608682 624 ntBASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 AP005137.2-201ENST00000609238 400 ntBASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RTFDC1Q9BY42 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 SNORA40.2-201ENST00000390847 128 ntBASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 SNORA57.1-201ENST00000391227 145 ntBASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 OR6C69P-201ENST00000394268 893 ntBASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 HIGD1AP4-201ENST00000430194 280 ntBASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 RPS26P40-201ENST00000435209 294 ntBASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 PTENP1-201ENST00000447117 1215 ntBASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 AC004022.1-201ENST00000447766 1066 ntBASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 AC006511.1-201ENST00000470614 315 ntBASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 VPS26AP1-201ENST00000483197 979 ntBASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 AC112673.1-201ENST00000513168 575 ntBASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 AC061975.8-201ENST00000587058 721 ntBASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 AC010503.3-201ENST00000594355 540 ntBASIC5.79□□□□□ -1.48
RTFDC1Q9BY42 AL137072.1-201ENST00000603444 466 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms