Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 CUL4AP1-201ENST00000514750 1863 ntBASIC3.67□□□□□ -1.82
RSPO3Q9BXY4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 AC134882.1-201ENST00000603738 1676 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 BDP1P-201ENST00000582658 1990 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 AC092647.1-201ENST00000420654 287 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 ATP5HP2-201ENST00000433885 485 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 CDC27P1-201ENST00000445384 715 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 YWHAQP9-201ENST00000445891 512 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 OR7L1P-201ENST00000456181 380 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 AC069499.1-201ENST00000489433 509 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 RPL29P14-201ENST00000495837 428 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 AC106806.2-201ENST00000509365 500 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 AC026726.1-201ENST00000512859 601 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 AC087369.1-201ENST00000520775 996 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 AC084824.1-201ENST00000550917 1005 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 AC025884.1-201ENST00000556034 378 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 AC023575.1-201ENST00000580510 358 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 KPNA2P3-201ENST00000584190 848 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 CCDC58P3-201ENST00000590792 430 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 AC010615.3-201ENST00000597319 394 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 AC068790.5-201ENST00000602741 355 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 AL451044.1-201ENST00000604867 238 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 AC078899.5-201ENST00000612475 178 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 AC004825.2-201ENST00000616634 455 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 AC124312.6-202ENST00000623624 418 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 FAM35DP-201ENST00000323387 2712 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 AC100871.1-201ENST00000507871 1456 ntBASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.66□□□□□ -1.82
RSPO3Q9BXY4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RSPO3Q9BXY4 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.65□□□□□ -1.82
RSPO3Q9BXY4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.82
RSPO3Q9BXY4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 RNA5SP130-201ENST00000364431 114 ntBASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 AL589994.1-201ENST00000404962 340 ntBASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 AC115285.1-201ENST00000424879 736 ntBASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 AC087650.1-201ENST00000431445 468 ntBASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 FCF1P7-201ENST00000451185 558 ntBASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 AC016687.1-201ENST00000482574 353 ntBASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 RN7SL271P-201ENST00000487601 295 ntBASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 SNORA48.9-201ENST00000516419 162 ntBASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 NDUFA5P2-201ENST00000519723 344 ntBASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 MTND2P17-201ENST00000550281 688 ntBASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 AC069366.1-201ENST00000583159 838 ntBASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 VN1R85P-201ENST00000601587 426 ntBASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 SNX6P1-201ENST00000601728 1224 ntBASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 OR6R2P-201ENST00000609216 300 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms