Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.88□□□□□ -1.63
RPAP1Q9BWH6 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.88□□□□□ -1.63
RPAP1Q9BWH6 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.88□□□□□ -1.63
RPAP1Q9BWH6 AC090281.1-201ENST00000523019 276 ntBASIC4.88□□□□□ -1.63
RPAP1Q9BWH6 AC109635.6-201ENST00000525487 1113 ntBASIC4.88□□□□□ -1.63
RPAP1Q9BWH6 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.88□□□□□ -1.63
RPAP1Q9BWH6 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.88□□□□□ -1.63
RPAP1Q9BWH6 HNRNPCP4-201ENST00000571636 900 ntBASIC4.88□□□□□ -1.63
RPAP1Q9BWH6 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.88□□□□□ -1.63
RPAP1Q9BWH6 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.88□□□□□ -1.63
RPAP1Q9BWH6 AL592436.1-201ENST00000605135 558 ntBASIC4.88□□□□□ -1.63
RPAP1Q9BWH6 RMST_9.1-201ENST00000619945 193 ntBASIC4.88□□□□□ -1.63
RPAP1Q9BWH6 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.88□□□□□ -1.63
RPAP1Q9BWH6 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RPAP1Q9BWH6 DDX18P3-201ENST00000404856 2007 ntBASIC4.88□□□□□ -1.63
RPAP1Q9BWH6 AC015813.6-201ENST00000624409 5808 ntBASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 AC018529.3-201ENST00000624212 2254 ntBASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 Y_RNA.62-201ENST00000362840 99 ntBASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 RNU6-213P-201ENST00000384051 104 ntBASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 MIR449B-201ENST00000384995 97 ntBASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 AC073136.2-201ENST00000417282 849 ntBASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 IPMKP1-201ENST00000425988 855 ntBASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 AL050321.1-201ENST00000432363 400 ntBASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 RPL23AP83-201ENST00000434984 473 ntBASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 AL500522.2-201ENST00000448562 343 ntBASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 OR6C72P-201ENST00000451403 892 ntBASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 AC007688.1-201ENST00000475592 759 ntBASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 CCNHP1-201ENST00000513311 678 ntBASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 IGKV2-38-201ENST00000517443 247 ntBASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 AC112230.1-201ENST00000604342 547 ntBASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 AC026368.1-201ENST00000614934 690 ntBASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 AL773545.4-201ENST00000637262 310 ntBASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 AL513478.4-201ENST00000641636 310 ntBASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RPAP1Q9BWH6 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 OR5BE1P-201ENST00000425977 939 ntBASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 RPL37P1-201ENST00000432310 284 ntBASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 NOTCH2P1-201ENST00000443481 624 ntBASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 RPL6P5-201ENST00000445678 828 ntBASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 FCF1P7-201ENST00000451185 558 ntBASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 RPL7P15-201ENST00000461190 712 ntBASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 AC092691.2-201ENST00000461787 803 ntBASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 CCDC75P1-201ENST00000469247 791 ntBASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 VWA8P1-201ENST00000510889 176 ntBASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 RN7SKP34-201ENST00000516142 244 ntBASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 NPM1P52-201ENST00000518264 846 ntBASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 AC022968.1-201ENST00000567372 442 ntBASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 AC012417.1-201ENST00000582307 1039 ntBASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 AC107982.3-201ENST00000584957 985 ntBASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 AC104662.1-201ENST00000604448 511 ntBASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 AL354798.1-201ENST00000622505 329 ntBASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 OR5BE1P-202ENST00000641168 1176 ntBASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 AC006042.3-201ENST00000454684 1469 ntBASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 AC087190.4-201ENST00000574616 8334 ntBASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 LINC01355-201ENST00000566551 5444 ntBASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RPAP1Q9BWH6 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms