Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 RNU6-730P-201ENST00000383954 104 ntBASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 GLULP6-201ENST00000399502 913 ntBASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 RPEP2-201ENST00000432149 701 ntBASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 GAPDHP23-201ENST00000444823 993 ntBASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 AC005077.1-201ENST00000449226 375 ntBASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 RPS4XP10-201ENST00000465034 731 ntBASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 RPS4XP14-201ENST00000493072 781 ntBASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 AC105252.1-201ENST00000503089 286 ntBASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 RN7SKP238-201ENST00000516483 249 ntBASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 RNU6-506P-201ENST00000516553 94 ntBASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 RN7SKP234-201ENST00000517173 224 ntBASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 MTND4LP26-201ENST00000518144 282 ntBASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 AL161713.1-201ENST00000555538 145 ntBASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 MIR4458-201ENST00000578872 75 ntBASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 AP005119.1-201ENST00000580956 292 ntBASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 MIR3614-201ENST00000581261 86 ntBASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 NRBF2P1-201ENST00000587407 859 ntBASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 AC008555.7-201ENST00000605008 583 ntBASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 RNU6-87P-201ENST00000607561 108 ntBASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 AC108673.3-201ENST00000609183 335 ntBASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 AC138649.3-201ENST00000622154 254 ntBASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
TRAIPQ9BWF2 AC005224.3-201ENST00000584683 2140 ntBASIC6.71□□□□□ -1.33
TRAIPQ9BWF2 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
TRAIPQ9BWF2 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
TRAIPQ9BWF2 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.33
TRAIPQ9BWF2 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.71□□□□□ -1.33
TRAIPQ9BWF2 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
TRAIPQ9BWF2 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.71□□□□□ -1.33
TRAIPQ9BWF2 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
TRAIPQ9BWF2 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 RNA5SP273-201ENST00000362484 113 ntBASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 RNA5SP258-201ENST00000362750 119 ntBASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 Y_RNA.296-201ENST00000364930 108 ntBASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 RPS20P2-201ENST00000402520 389 ntBASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 ERMN-204ENST00000409925 556 ntTSL 4 BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 AL359704.1-201ENST00000411586 781 ntBASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 RPS17P17-201ENST00000419392 409 ntBASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 UBE2V1P13-201ENST00000436983 439 ntBASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 MTND6P13-201ENST00000443510 523 ntBASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 FTLP8-201ENST00000446770 267 ntBASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 SETP2-201ENST00000553886 926 ntBASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 AC087481.2-201ENST00000565492 330 ntBASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 VN1R79P-201ENST00000593540 513 ntBASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 MIR6793-201ENST00000612376 63 ntBASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 KYNUP3-201ENST00000574386 1341 ntBASIC6.71□□□□□ -1.34
TRAIPQ9BWF2 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms