Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 RNA5SP507-201ENST00000363603 121 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AL355143.1-201ENST00000407101 841 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AP000357.1-201ENST00000409926 1165 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 SNRPFP1-201ENST00000414761 252 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AL139095.3-201ENST00000419672 1203 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AC006065.1-201ENST00000422539 802 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 HSFY1P1-201ENST00000423928 1178 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 RPL12P34-201ENST00000424532 479 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 IFNNP1-201ENST00000429219 553 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 CEACAMP1-201ENST00000434624 1035 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AC093716.1-201ENST00000435923 377 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 MTCYBP12-201ENST00000440559 1134 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 RNF2P1-201ENST00000442955 1010 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 RNFT1P2-201ENST00000443064 757 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AC023512.1-201ENST00000444513 499 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 CALM1P2-201ENST00000452941 448 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 RN7SL738P-201ENST00000470264 297 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 RPL7AP6-201ENST00000477943 801 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AC119751.4-201ENST00000507498 357 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 HMGN2P6-201ENST00000551091 273 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AC063950.1-201ENST00000552036 308 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AC084757.1-201ENST00000559987 490 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AC023158.1-201ENST00000561632 1025 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AP001160.4-201ENST00000596971 382 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AC084373.1-201ENST00000603311 235 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AC123786.2-201ENST00000603459 275 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AC079880.2-201ENST00000603790 1213 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AC128687.2-201ENST00000609657 566 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AC116447.1-201ENST00000613153 453 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 AC114546.3-201ENST00000623582 1734 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 HSPA8P19-201ENST00000505359 1517 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 NCAPGP1-201ENST00000505112 1814 ntBASIC4.14□□□□□ -1.75
CCDC28BQ9BUN5 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 OR4K17-201ENST00000315543 1032 ntBASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 MIR620-201ENST00000385232 95 ntBASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 MT-TP-201ENST00000387461 68 ntBASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 MIR1179-201ENST00000408703 91 ntBASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 RPL23AP27-201ENST00000415161 451 ntBASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 AL159169.1-201ENST00000421119 127 ntBASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 AL354692.1-201ENST00000423044 315 ntBASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 AL645939.1-201ENST00000453429 797 ntBASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 DHFRP3-201ENST00000455595 559 ntBASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 RN7SL93P-201ENST00000463035 293 ntBASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 AC068305.1-201ENST00000497406 726 ntBASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 CAB39P1-201ENST00000502277 460 ntBASIC4.13□□□□□ -1.75
CCDC28BQ9BUN5 BTF3L4P4-201ENST00000506381 449 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms