Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.03□□□□□ -1.76
SSX3Q99909 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.03□□□□□ -1.76
SSX3Q99909 UBE2V1P5-201ENST00000440070 405 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 AC009263.1-201ENST00000441193 1239 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 PPIAP3-201ENST00000450588 505 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.03□□□□□ -1.76
SSX3Q99909 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.03□□□□□ -1.76
SSX3Q99909 RPL23AP65-201ENST00000475608 468 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.03□□□□□ -1.76
SSX3Q99909 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.03□□□□□ -1.76
SSX3Q99909 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.03□□□□□ -1.76
SSX3Q99909 RNA5SP154-201ENST00000516193 111 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 RN7SKP96-201ENST00000516948 297 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.03□□□□□ -1.76
SSX3Q99909 AC021006.3-201ENST00000530771 192 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.03□□□□□ -1.76
SSX3Q99909 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.03□□□□□ -1.76
SSX3Q99909 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.03□□□□□ -1.76
SSX3Q99909 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.03□□□□□ -1.76
SSX3Q99909 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.03□□□□□ -1.76
SSX3Q99909 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SSX3Q99909 AC008638.3-201ENST00000603341 463 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 AC087783.2-201ENST00000605070 562 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 FAM25E-202ENST00000608562 189 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 AP001521.2-201ENST00000608772 546 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.03□□□□□ -1.76
SSX3Q99909 AL359535.1-201ENST00000612100 1087 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 AC108359.1-201ENST00000616451 1211 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 AC019206.1-201ENST00000621938 425 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.03□□□□□ -1.76
SSX3Q99909 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.03□□□□□ -1.76
SSX3Q99909 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSX3Q99909 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SSX3Q99909 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SSX3Q99909 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSX3Q99909 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.03□□□□□ -1.76
SSX3Q99909 AL359922.3-201ENST00000624779 1670 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 XPOTP1-201ENST00000443317 2398 ntBASIC4.03□□□□□ -1.76
SSX3Q99909 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.03□□□□□ -1.77
SSX3Q99909 AC073055.1-201ENST00000456901 1621 ntBASIC4.03□□□□□ -1.77
SSX3Q99909 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SSX3Q99909 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.02□□□□□ -1.77
SSX3Q99909 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SSX3Q99909 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SSX3Q99909 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
SSX3Q99909 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SSX3Q99909 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.02□□□□□ -1.77
SSX3Q99909 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SSX3Q99909 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SSX3Q99909 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SSX3Q99909 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SSX3Q99909 RNU1-108P-201ENST00000362556 161 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.02□□□□□ -1.77
SSX3Q99909 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SSX3Q99909 RNU6-207P-201ENST00000384137 107 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SSX3Q99909 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.02□□□□□ -1.77
SSX3Q99909 SNORA11C-201ENST00000408532 129 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SSX3Q99909 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.02□□□□□ -1.77
SSX3Q99909 AC246680.2-201ENST00000422106 389 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.02□□□□□ -1.77
SSX3Q99909 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.02□□□□□ -1.77
SSX3Q99909 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.02□□□□□ -1.77
SSX3Q99909 FABP5P3-201ENST00000437960 408 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 TXNP5-201ENST00000441043 315 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 RPL7P33-201ENST00000444159 742 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 RPL23AP15-201ENST00000450202 459 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 AC091685.2-201ENST00000454924 864 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.02□□□□□ -1.77
SSX3Q99909 RN7SL517P-201ENST00000462240 305 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 AC092324.1-201ENST00000468671 324 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 RPL21P18-201ENST00000469899 480 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 AC126121.1-201ENST00000482313 553 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.02□□□□□ -1.77
SSX3Q99909 PTGES3P3-201ENST00000511479 482 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 BTF3P13-201ENST00000513224 490 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.02□□□□□ -1.77
SSX3Q99909 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.02□□□□□ -1.77
SSX3Q99909 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.02□□□□□ -1.77
SSX3Q99909 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.02□□□□□ -1.77
SSX3Q99909 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.02□□□□□ -1.77
SSX3Q99909 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.02□□□□□ -1.77
SSX3Q99909 AC006116.7-201ENST00000590141 756 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.02□□□□□ -1.77
SSX3Q99909 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.02□□□□□ -1.77
SSX3Q99909 AP002906.1-201ENST00000603405 233 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 BNIP3P31-201ENST00000604515 566 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 AC005377.1-201ENST00000605126 456 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 AL138955.1-201ENST00000622881 1040 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 C2orf27A-204ENST00000623058 969 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 AC091953.3-201ENST00000623220 236 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 AC092608.3-201ENST00000625017 386 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.02□□□□□ -1.77
SSX3Q99909 AC046144.1-201ENST00000478559 1853 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SSX3Q99909 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
SSX3Q99909 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms