Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.12□□□□□ -1.91
CSMD1Q96PZ7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 CA1-225ENST00000626824 2405 ntTSL 5 BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 AC112198.2-201ENST00000426589 6996 ntBASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 NACAP7-201ENST00000407371 609 ntBASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 NPM1P28-201ENST00000492269 840 ntBASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 AC093849.1-201ENST00000563631 2209 ntBASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 RNU6-7-201ENST00000364784 107 ntBASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 RNU6-8-201ENST00000365467 107 ntBASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 SNORA44-201ENST00000384584 132 ntBASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 MIR199A2-201ENST00000385289 110 ntBASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 RN7SL432P-201ENST00000484057 298 ntBASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 AC069240.1-201ENST00000548774 375 ntBASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 SLC25A36P1-201ENST00000590111 465 ntBASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 AC008966.2-201ENST00000606157 453 ntBASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 AL354976.1-201ENST00000613843 387 ntBASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 AC124312.6-202ENST00000623624 418 ntBASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 FTH1P1-201ENST00000437933 532 ntBASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 VN1R104P-201ENST00000505115 1009 ntBASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 IGLV3-26-201ENST00000520756 302 ntBASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 AC006539.2-201ENST00000601729 572 ntBASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 AL392088.2-201ENST00000637607 285 ntBASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CSMD1Q96PZ7 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 AC006504.1-201ENST00000562493 3666 ntBASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 RPS23P10-201ENST00000416185 486 ntBASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 SNORA71B-202ENST00000439232 272 ntBASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 AC010591.1-201ENST00000603941 649 ntBASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 AC092435.4-201ENST00000623012 4159 ntBASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 AC073522.1-201ENST00000483312 377 ntBASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 RNA5SP208-201ENST00000516156 78 ntBASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 SNORA70.18-201ENST00000516696 98 ntBASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 AL136360.1-201ENST00000503377 1900 ntBASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 SRIP2-201ENST00000428470 166 ntBASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 RPL23AP69-201ENST00000431134 458 ntBASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 FDX1P2-201ENST00000450769 375 ntBASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 LARP7P3-201ENST00000579888 337 ntBASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.1□□□□□ -1.91
CSMD1Q96PZ7 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
CSMD1Q96PZ7 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms