Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.47□□□□□ -1.37
SYNGAP1Q96PV0 PTGES3P3-201ENST00000511479 482 ntBASIC6.47□□□□□ -1.37
SYNGAP1Q96PV0 RPL7L1P13-201ENST00000511702 739 ntBASIC6.47□□□□□ -1.37
SYNGAP1Q96PV0 LRRC34P2-201ENST00000514850 553 ntBASIC6.47□□□□□ -1.37
SYNGAP1Q96PV0 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.47□□□□□ -1.37
SYNGAP1Q96PV0 AC090424.1-201ENST00000535243 736 ntBASIC6.47□□□□□ -1.37
SYNGAP1Q96PV0 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC6.47□□□□□ -1.37
SYNGAP1Q96PV0 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.47□□□□□ -1.37
SYNGAP1Q96PV0 UBE2V2P2-201ENST00000587677 504 ntBASIC6.47□□□□□ -1.37
SYNGAP1Q96PV0 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNGAP1Q96PV0 AC090607.5-201ENST00000615692 224 ntBASIC6.47□□□□□ -1.37
SYNGAP1Q96PV0 AC024614.3-201ENST00000637860 256 ntBASIC6.47□□□□□ -1.37
SYNGAP1Q96PV0 AC087516.1-201ENST00000561236 2428 ntBASIC6.47□□□□□ -1.37
SYNGAP1Q96PV0 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.47□□□□□ -1.37
SYNGAP1Q96PV0 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNGAP1Q96PV0 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.46□□□□□ -1.37
SYNGAP1Q96PV0 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SYNGAP1Q96PV0 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SYNGAP1Q96PV0 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
SYNGAP1Q96PV0 AC006600.2-201ENST00000624834 2506 ntBASIC6.46□□□□□ -1.37
SYNGAP1Q96PV0 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.37
SYNGAP1Q96PV0 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
SYNGAP1Q96PV0 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 AC011447.7-201ENST00000624228 1590 ntBASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 GTF2H2B-203ENST00000508065 1432 ntBASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 MT-TD-201ENST00000387419 68 ntBASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 RPL7P58-201ENST00000402913 758 ntBASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 RPS16P5-201ENST00000406501 404 ntBASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 CYCSP12-201ENST00000437729 300 ntBASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 AC019185.1-201ENST00000442718 389 ntBASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 RPL31P44-201ENST00000447680 377 ntBASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 RN7SL172P-201ENST00000460535 303 ntBASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 AC090638.1-201ENST00000498296 909 ntBASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 AC011352.3-201ENST00000505162 593 ntBASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 HIGD1AP14-201ENST00000507617 282 ntBASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 RNY4P37-201ENST00000516225 96 ntBASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 AP001004.1-201ENST00000582468 324 ntBASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 AC020914.6-201ENST00000594327 272 ntBASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 UBE2Q2P2-203ENST00000613592 761 ntBASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 AC009159.1-201ENST00000618386 642 ntBASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 AL136221.1-201ENST00000621449 509 ntBASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 AC132068.1-201ENST00000623805 459 ntBASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.46□□□□□ -1.38
SYNGAP1Q96PV0 MSL3P1-202ENST00000440028 1468 ntBASIC6.45□□□□□ -1.38
SYNGAP1Q96PV0 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SYNGAP1Q96PV0 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNGAP1Q96PV0 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.45□□□□□ -1.38
SYNGAP1Q96PV0 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNGAP1Q96PV0 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
SYNGAP1Q96PV0 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNGAP1Q96PV0 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNGAP1Q96PV0 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNGAP1Q96PV0 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNGAP1Q96PV0 AL161756.3-201ENST00000641216 2071 ntBASIC6.45□□□□□ -1.38
SYNGAP1Q96PV0 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNGAP1Q96PV0 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.45□□□□□ -1.38
SYNGAP1Q96PV0 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNGAP1Q96PV0 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNGAP1Q96PV0 Y_RNA.160-201ENST00000363677 92 ntBASIC6.45□□□□□ -1.38
SYNGAP1Q96PV0 RNU6-1090P-201ENST00000364065 94 ntBASIC6.45□□□□□ -1.38
SYNGAP1Q96PV0 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNGAP1Q96PV0 Y_RNA.402-201ENST00000383972 102 ntBASIC6.45□□□□□ -1.38
SYNGAP1Q96PV0 Y_RNA.573-201ENST00000384763 105 ntBASIC6.45□□□□□ -1.38
SYNGAP1Q96PV0 MIR223-201ENST00000385204 110 ntBASIC6.45□□□□□ -1.38
SYNGAP1Q96PV0 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SYNGAP1Q96PV0 RPS3AP36-201ENST00000398190 775 ntBASIC6.45□□□□□ -1.38
SYNGAP1Q96PV0 ARL4AP5-201ENST00000404372 599 ntBASIC6.45□□□□□ -1.38
SYNGAP1Q96PV0 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNGAP1Q96PV0 SLC35E1P1-201ENST00000419313 864 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms