Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.88□□□□□ -1.79
COL21A1Q96P44 AF228730.2-201ENST00000438784 848 ntBASIC3.88□□□□□ -1.79
COL21A1Q96P44 AL356535.1-201ENST00000440335 398 ntBASIC3.88□□□□□ -1.79
COL21A1Q96P44 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.88□□□□□ -1.79
COL21A1Q96P44 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.88□□□□□ -1.79
COL21A1Q96P44 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.88□□□□□ -1.79
COL21A1Q96P44 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.88□□□□□ -1.79
COL21A1Q96P44 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.88□□□□□ -1.79
COL21A1Q96P44 AC010618.1-201ENST00000469924 477 ntBASIC3.88□□□□□ -1.79
COL21A1Q96P44 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.88□□□□□ -1.79
COL21A1Q96P44 AC108120.2-201ENST00000512973 294 ntBASIC3.88□□□□□ -1.79
COL21A1Q96P44 AC034244.2-201ENST00000514668 858 ntBASIC3.88□□□□□ -1.79
COL21A1Q96P44 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.88□□□□□ -1.79
COL21A1Q96P44 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.88□□□□□ -1.79
COL21A1Q96P44 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.88□□□□□ -1.79
COL21A1Q96P44 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.88□□□□□ -1.79
COL21A1Q96P44 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.88□□□□□ -1.79
COL21A1Q96P44 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.88□□□□□ -1.79
COL21A1Q96P44 MIR1254-2-201ENST00000579553 63 ntBASIC3.88□□□□□ -1.79
COL21A1Q96P44 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.88□□□□□ -1.79
COL21A1Q96P44 AC005962.2-201ENST00000611427 652 ntBASIC3.88□□□□□ -1.79
COL21A1Q96P44 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL21A1Q96P44 AC006338.2-201ENST00000616864 791 ntBASIC3.88□□□□□ -1.79
COL21A1Q96P44 AL645927.2-201ENST00000618350 349 ntBASIC3.88□□□□□ -1.79
COL21A1Q96P44 AC016717.3-201ENST00000624730 554 ntBASIC3.88□□□□□ -1.79
COL21A1Q96P44 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.88□□□□□ -1.79
COL21A1Q96P44 MIR6830-201ENST00000636015 70 ntBASIC3.88□□□□□ -1.79
COL21A1Q96P44 MAPK10-373ENST00000641983 6772 ntBASIC3.88□□□□□ -1.79
COL21A1Q96P44 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
COL21A1Q96P44 PNPT1P2-201ENST00000456768 2050 ntBASIC3.88□□□□□ -1.79
COL21A1Q96P44 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.88□□□□□ -1.79
COL21A1Q96P44 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.88□□□□□ -1.79
COL21A1Q96P44 LARP1BP1-201ENST00000506036 1359 ntBASIC3.88□□□□□ -1.79
COL21A1Q96P44 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.87□□□□□ -1.79
COL21A1Q96P44 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.87□□□□□ -1.79
COL21A1Q96P44 AC009951.1-201ENST00000623674 2614 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.87□□□□□ -1.79
COL21A1Q96P44 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COL21A1Q96P44 RNU6-304P-201ENST00000364855 107 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 SNORA37-201ENST00000384504 129 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
COL21A1Q96P44 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COL21A1Q96P44 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.87□□□□□ -1.79
COL21A1Q96P44 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 CYP4F29P-201ENST00000420685 446 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 AL158073.1-201ENST00000426848 1104 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COL21A1Q96P44 AL606490.7-201ENST00000433136 191 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 BTF3P10-201ENST00000433415 495 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 UBE2V2P3-201ENST00000433562 437 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.87□□□□□ -1.79
COL21A1Q96P44 YWHAQP9-201ENST00000445891 512 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 NUTF2P3-201ENST00000448540 384 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 AC069499.1-201ENST00000489433 509 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COL21A1Q96P44 AC099522.1-202ENST00000514718 367 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.87□□□□□ -1.79
COL21A1Q96P44 AP003730.1-201ENST00000524605 285 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 AC105233.3-201ENST00000531125 744 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.87□□□□□ -1.79
COL21A1Q96P44 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.87□□□□□ -1.79
COL21A1Q96P44 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.87□□□□□ -1.79
COL21A1Q96P44 AC068714.1-201ENST00000559623 800 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 AC009268.1-201ENST00000561352 1203 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.87□□□□□ -1.79
COL21A1Q96P44 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.87□□□□□ -1.79
COL21A1Q96P44 AP003392.5-201ENST00000607857 415 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 AC084036.1-201ENST00000609190 508 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 MIR6716-201ENST00000613413 80 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 AL445567.2-201ENST00000618935 498 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 MIR8059-201ENST00000620427 81 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 AC095038.2-201ENST00000621464 1070 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 FAM35DP-201ENST00000323387 2712 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COL21A1Q96P44 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL21A1Q96P44 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL21A1Q96P44 BDP1P-201ENST00000582658 1990 ntBASIC3.87□□□□□ -1.79
COL21A1Q96P44 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL21A1Q96P44 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.86□□□□□ -1.79
COL21A1Q96P44 AL118496.1-201ENST00000440201 1812 ntBASIC3.86□□□□□ -1.79
COL21A1Q96P44 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.86□□□□□ -1.79
COL21A1Q96P44 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL21A1Q96P44 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.86□□□□□ -1.79
COL21A1Q96P44 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL21A1Q96P44 AL133412.1-201ENST00000380194 2992 ntBASIC3.86□□□□□ -1.79
COL21A1Q96P44 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.86□□□□□ -1.79
COL21A1Q96P44 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.86□□□□□ -1.79
COL21A1Q96P44 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL21A1Q96P44 GSTA12P-201ENST00000402398 508 ntBASIC3.86□□□□□ -1.79
COL21A1Q96P44 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL21A1Q96P44 AMZ2P2-201ENST00000406819 1057 ntBASIC3.86□□□□□ -1.79
COL21A1Q96P44 PGBD4P8-201ENST00000412993 562 ntBASIC3.86□□□□□ -1.79
COL21A1Q96P44 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.86□□□□□ -1.79
COL21A1Q96P44 RPL17P36-201ENST00000420302 549 ntBASIC3.86□□□□□ -1.79
COL21A1Q96P44 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.86□□□□□ -1.79
COL21A1Q96P44 USP12PY-201ENST00000427677 1064 ntBASIC3.86□□□□□ -1.79
COL21A1Q96P44 AC011742.1-201ENST00000431448 434 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms