Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RPL7AP6-201ENST00000477943 801 ntBASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 GAPDHP39-201ENST00000481866 979 ntBASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 AC010285.3-201ENST00000511668 676 ntBASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 AC005868.1-201ENST00000536421 331 ntBASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 MIR4666A-201ENST00000580160 79 ntBASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 AC115085.1-201ENST00000588924 229 ntBASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 AC004223.2-201ENST00000590309 544 ntBASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 AC011453.2-201ENST00000603737 729 ntBASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 AC012414.7-202ENST00000622705 1090 ntBASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 AL157770.1-201ENST00000623049 439 ntBASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 AC091905.4-201ENST00000623432 202 ntBASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 AC099654.2-201ENST00000433031 1980 ntBASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 MAPK10-263ENST00000641052 4307 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 AC090971.4-201ENST00000560291 1800 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 SGO1P1-201ENST00000603525 1447 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 AC009643.2-201ENST00000603543 1448 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 SNORD113-6-201ENST00000363345 75 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 SPTLC1P2-201ENST00000407089 121 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 TBCAP2-201ENST00000416175 326 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 RBMY2QP-201ENST00000429799 1147 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 GTF2IP7-202ENST00000436677 309 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 AC079776.3-201ENST00000450665 370 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 AL122001.1-201ENST00000457027 370 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 RPL23AP71-201ENST00000470966 469 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 RNA5SP249-201ENST00000516127 99 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 AC027308.1-201ENST00000517993 110 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 AP006245.2-201ENST00000522004 300 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 C1GALT1P3-201ENST00000522049 819 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 MTND2P26-201ENST00000528255 1029 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 BNIP3P1-201ENST00000547295 580 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 AC010198.2-201ENST00000550612 259 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 NBEAP1-201ENST00000554452 979 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 BPTFP1-201ENST00000579209 492 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 SNORA74C-1-201ENST00000580726 201 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 AC133552.5-201ENST00000604266 540 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 AL133507.1-201ENST00000605269 557 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 AC090948.2-201ENST00000607363 564 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 AC016769.4-201ENST00000616893 535 ntBASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDK5RAP3Q96JB5 AC000123.3-201ENST00000624029 4975 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 SNORD116-8-201ENST00000384365 95 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 SNORA70-201ENST00000384436 135 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms