Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 GAPDHP42-201ENST00000406848 981 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AL450338.1-201ENST00000407987 512 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 RN7SKP229-201ENST00000410465 302 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 HMGB1P11-201ENST00000413899 637 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AC092634.6-201ENST00000418558 192 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AL133173.1-201ENST00000423458 397 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AC073410.1-201ENST00000435125 589 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AL590399.4-201ENST00000436561 601 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 GAPDHP48-201ENST00000436626 961 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AC108463.1-201ENST00000450258 347 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AC098824.1-201ENST00000453565 980 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 RPL23AP71-201ENST00000470966 469 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AC023424.2-201ENST00000493479 777 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 SCARNA21.2-201ENST00000516600 166 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 RN7SKP99-201ENST00000517028 307 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 IGKV2-36-201ENST00000519999 223 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 SERPINE4P-201ENST00000554978 281 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AL121579.1-201ENST00000555129 305 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 NPM1P42-201ENST00000560329 862 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AC007225.2-201ENST00000562529 256 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 BGLT3-201ENST00000564523 994 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AC136618.2-201ENST00000575091 400 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 MIR3913-1-201ENST00000577744 102 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AC012417.1-201ENST00000582307 1039 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AL022154.1-201ENST00000604698 785 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 NANOGP3-201ENST00000605855 286 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 RNU6-88P-201ENST00000606801 100 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AC004067.1-201ENST00000608733 700 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AL359535.1-201ENST00000612100 1087 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AC109309.2-201ENST00000612597 332 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AC234782.5-201ENST00000617723 324 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AC243756.2-201ENST00000618406 463 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 AC138649.3-201ENST00000622154 254 ntBASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM48Q8IWZ4 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 RNA5SP453-201ENST00000362503 119 ntBASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 RN7SKP124-201ENST00000364730 341 ntBASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 RNA5SP131-201ENST00000365452 119 ntBASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 AC025750.1-201ENST00000399891 379 ntBASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 AIMP1P1-201ENST00000418670 937 ntBASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 AL354766.1-201ENST00000423396 542 ntBASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 CNOT7P2-201ENST00000441051 832 ntBASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 AL662791.1-201ENST00000441992 928 ntBASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 RAB11AP1-201ENST00000442978 646 ntBASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 Z99127.3-201ENST00000448158 395 ntBASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 NDUFA5P7-201ENST00000452914 242 ntBASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 AL359385.1-201ENST00000456509 365 ntBASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 SNORD42A-201ENST00000459584 64 ntBASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 RPS3AP17-201ENST00000472594 777 ntBASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 EIF3LP3-201ENST00000495197 822 ntBASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 NRBF2P4-201ENST00000520874 850 ntBASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 HIGD1AP6-201ENST00000521833 279 ntBASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.51□□□□□ -1.53
TRIM48Q8IWZ4 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms