Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AL133372.1-201ENST00000493565 745 ntBASIC4.12□□□□□ -1.75
CDKL3Q8IVW4 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.12□□□□□ -1.75
CDKL3Q8IVW4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.12□□□□□ -1.75
CDKL3Q8IVW4 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDKL3Q8IVW4 MIR4284-201ENST00000578924 81 ntBASIC4.12□□□□□ -1.75
CDKL3Q8IVW4 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.12□□□□□ -1.75
CDKL3Q8IVW4 AC010615.3-201ENST00000597319 394 ntBASIC4.12□□□□□ -1.75
CDKL3Q8IVW4 AC083899.3-201ENST00000603413 594 ntBASIC4.12□□□□□ -1.75
CDKL3Q8IVW4 AL049844.2-201ENST00000604280 628 ntBASIC4.12□□□□□ -1.75
CDKL3Q8IVW4 ARF4P1-201ENST00000605447 541 ntBASIC4.12□□□□□ -1.75
CDKL3Q8IVW4 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.12□□□□□ -1.75
CDKL3Q8IVW4 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.12□□□□□ -1.75
CDKL3Q8IVW4 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.12□□□□□ -1.75
CDKL3Q8IVW4 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.12□□□□□ -1.75
CDKL3Q8IVW4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.12□□□□□ -1.75
CDKL3Q8IVW4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDKL3Q8IVW4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDKL3Q8IVW4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDKL3Q8IVW4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 MAPK10-253ENST00000641010 4072 ntBASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 CCT8P1-201ENST00000413611 1657 ntBASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 OR6C69P-201ENST00000394268 893 ntBASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 RAB28P1-201ENST00000411517 641 ntBASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 RPL7P53-201ENST00000421245 739 ntBASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 COX6CP15-201ENST00000426313 211 ntBASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 HIGD1AP4-201ENST00000430194 280 ntBASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 KCTD9P3-201ENST00000434597 1169 ntBASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 AC073143.1-201ENST00000436316 395 ntBASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 AC239809.1-201ENST00000450470 217 ntBASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 SNRPGP5-201ENST00000456003 220 ntBASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 AC109458.1-201ENST00000508858 316 ntBASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 SNORD116-30-201ENST00000516468 85 ntBASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 RAB9BP1-201ENST00000519581 626 ntBASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 AC034205.1-201ENST00000520621 638 ntBASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 AP005901.4-201ENST00000577336 569 ntBASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 MIR4458-201ENST00000578872 75 ntBASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 MIR4512-201ENST00000583257 77 ntBASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 MIR3138-201ENST00000585238 82 ntBASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 MIR378J-201ENST00000611988 109 ntBASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CDKL3Q8IVW4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 RNU1-32P-201ENST00000363937 159 ntBASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 ENSAP1-201ENST00000392855 326 ntBASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 RPS27AP11-201ENST00000402798 447 ntBASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 AL391219.1-201ENST00000422570 483 ntBASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 OR6K4P-201ENST00000423179 955 ntBASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 MRPL50P1-201ENST00000431951 384 ntBASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 HMGB1P37-201ENST00000439613 609 ntBASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 AL356535.1-201ENST00000440335 398 ntBASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 YWHAQP9-201ENST00000445891 512 ntBASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 AC104306.1-201ENST00000449702 371 ntBASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 MTCO3P42-201ENST00000509488 518 ntBASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 AC026726.1-201ENST00000512859 601 ntBASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 MTCO3P39-201ENST00000514812 518 ntBASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 AC011477.5-201ENST00000586571 259 ntBASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 MIR6868-201ENST00000611215 58 ntBASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 AL445567.2-201ENST00000618935 498 ntBASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms