Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC079905.1-201ENST00000549280 475 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 NPM1P42-201ENST00000560329 862 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 HMGB1P6-201ENST00000569046 646 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 MIR3118-1-201ENST00000581787 76 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 NPIPB1P-202ENST00000588786 828 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 AL133215.3-201ENST00000609801 448 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 AC068831.8-201ENST00000620171 435 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 AC127024.6-201ENST00000621598 424 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 AL356585.4-201ENST00000623078 1229 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 AL078596.1-201ENST00000624856 447 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 AC129915.3-201ENST00000634128 948 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
RNF135Q8IUD6 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.9□□□□□ -1.31
RNF135Q8IUD6 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RNF135Q8IUD6 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.9□□□□□ -1.31
RNF135Q8IUD6 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.9□□□□□ -1.31
RNF135Q8IUD6 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
RNF135Q8IUD6 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RNF135Q8IUD6 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
RNF135Q8IUD6 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
RNF135Q8IUD6 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
RNF135Q8IUD6 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AC093278.2-201ENST00000564956 2485 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 OR5P1P-201ENST00000299512 925 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 RPL7P26-201ENST00000333817 754 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 RNU4-1-201ENST00000363925 141 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 RNU6-108P-201ENST00000365558 107 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 Y_RNA.384-201ENST00000383909 102 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 SNORA32.2-201ENST00000384049 122 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 Y_RNA.459-201ENST00000384251 102 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AL031679.1-201ENST00000400616 525 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AL078604.1-201ENST00000404609 466 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AL356967.1-201ENST00000406305 431 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AL139805.1-201ENST00000407837 289 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 RNA5SP178-201ENST00000410380 128 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 MTND3P8-201ENST00000412909 339 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 BX510359.3-201ENST00000422168 306 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 RBMY2QP-201ENST00000429799 1147 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AC091390.2-201ENST00000432573 374 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 HLA-DPA3-207ENST00000454398 229 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 RPS20P32-201ENST00000456044 356 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 MTCO3P2-201ENST00000457365 171 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 RN7SL629P-201ENST00000489622 285 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AC090453.1-201ENST00000495560 436 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AC021146.2-201ENST00000504736 556 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AC021220.1-201ENST00000507445 630 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AC112206.3-201ENST00000514578 389 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 RN7SKP13-201ENST00000515933 244 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 SNORD46.2-201ENST00000516021 102 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 BTF3P12-201ENST00000519620 469 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AC008429.2-201ENST00000523057 864 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AP003072.2-201ENST00000527756 676 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AC068714.1-201ENST00000559623 800 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 LARP7P2-201ENST00000575306 125 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 Z84480.1-201ENST00000605131 311 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AC090948.1-201ENST00000607464 549 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AC093913.1-201ENST00000614178 329 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 MIR6811-201ENST00000620409 58 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AC091953.2-201ENST00000623979 160 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AC090617.10-201ENST00000624308 134 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AL592429.1-201ENST00000403909 1473 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 CASC19-246ENST00000641625 1606 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 AC130304.1-201ENST00000622942 2385 ntBASIC6.89□□□□□ -1.31
RNF135Q8IUD6 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RNF135Q8IUD6 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms