Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 DISC2.1-201ENST00000612827 205 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 RFPL4AP6-201ENST00000616792 846 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 AC068722.2-201ENST00000618734 544 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 AC005725.1-201ENST00000577346 2607 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 AC027575.3-201ENST00000583058 2747 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 MAPK10-261ENST00000641050 3109 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 VPS35P1-201ENST00000563400 1518 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 RNU105B-201ENST00000364478 208 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 RPS4XP8-201ENST00000402039 771 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 RPS20P2-201ENST00000402520 389 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 RPL7P25-201ENST00000404151 721 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 RNA5SP156-201ENST00000410250 110 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 RN7SKP140-201ENST00000411196 284 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 MRPL50P2-201ENST00000416821 482 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 MTATP6P18-201ENST00000417994 673 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 AC016027.5-201ENST00000427227 210 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 TIMM8BP2-201ENST00000445940 251 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 RPL23AP60-201ENST00000450011 454 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 RBMY2TP-201ENST00000451162 947 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 PPIAP7-201ENST00000454070 489 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 RPS15AP17-201ENST00000470598 390 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 RPL7P42-201ENST00000481005 679 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 AP002453.1-201ENST00000492327 668 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 RN7SKP183-201ENST00000517169 324 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 AC105029.1-201ENST00000520250 669 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 AP000620.1-201ENST00000527147 504 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 AC093027.1-201ENST00000546698 429 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 AL109766.1-201ENST00000555080 552 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 AC124916.2-201ENST00000604416 224 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 AC004853.1-201ENST00000604902 698 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 AL359091.2-201ENST00000609303 556 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 AL512652.1-201ENST00000619006 500 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 AP002907.1-201ENST00000606361 1430 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 ERCC6-202ENST00000374127 1782 ntBASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBE3DQ7Z6J8 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 256.6 ms