Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LYSMD4Q5XG99 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
LYSMD4Q5XG99 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LYSMD4Q5XG99 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
LYSMD4Q5XG99 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.4□□□□□ -1.71
LYSMD4Q5XG99 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.4□□□□□ -1.71
LYSMD4Q5XG99 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
LYSMD4Q5XG99 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 AL451142.2-201ENST00000429076 2090 ntBASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 MIR372-201ENST00000362225 67 ntBASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 RNA5SP27-201ENST00000363839 119 ntBASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 RNA5SP283-201ENST00000365604 119 ntBASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 RNU6-146P-201ENST00000384602 108 ntBASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 RNU6-925P-201ENST00000384629 104 ntBASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 RPL22P22-201ENST00000395439 379 ntBASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 AL080315.1-201ENST00000406055 466 ntBASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 EIF4HP2-201ENST00000424380 563 ntBASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 RPL23AP52-201ENST00000439311 478 ntBASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 MTND6P18-201ENST00000439477 513 ntBASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 ARL5AP2-201ENST00000444698 533 ntBASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 AC104651.2-201ENST00000447549 528 ntBASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 RPL7L1P1-201ENST00000448259 785 ntBASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 MTATP6P14-201ENST00000455189 673 ntBASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 RN7SL132P-201ENST00000478131 296 ntBASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 TPT1P3-201ENST00000492841 512 ntBASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 AC110743.1-201ENST00000584870 478 ntBASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 FRG1EP-201ENST00000634469 770 ntBASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 OR8B1P-202ENST00000641132 1178 ntBASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 PHKBP1-201ENST00000450951 1951 ntBASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 RNF6P1-201ENST00000444889 1784 ntBASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LYSMD4Q5XG99 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 AC008549.2-201ENST00000333482 706 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 MIR3065-201ENST00000390137 79 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 ATP5F1P3-201ENST00000397213 657 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 AL161909.1-201ENST00000397390 712 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 GSTM3P2-201ENST00000412746 530 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 AC009237.10-201ENST00000414112 510 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 EIF4A1P1-201ENST00000420241 934 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 RPL7P2-201ENST00000427639 268 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 AL117339.2-201ENST00000430475 180 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 AL645931.1-201ENST00000439737 410 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 GEMIN8P3-201ENST00000445417 720 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 TDGF1P1-201ENST00000445734 527 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 AC021660.1-201ENST00000465006 554 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 AC008958.1-201ENST00000511047 682 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 NDUFB4P12-201ENST00000513465 390 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 FTH1P11-201ENST00000517577 551 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 SMARCE1P4-201ENST00000523647 241 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 AL121594.4-201ENST00000556211 1196 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 MIR4286-201ENST00000580651 93 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 AC079587.1-201ENST00000603846 277 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 AL158050.2-201ENST00000605336 568 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms