Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 AC092435.4-201ENST00000623012 4159 ntBASIC4.58□□□□□ -1.68
SGO1Q5FBB7 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SGO1Q5FBB7 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.58□□□□□ -1.68
SGO1Q5FBB7 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SGO1Q5FBB7 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SGO1Q5FBB7 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
SGO1Q5FBB7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SGO1Q5FBB7 AC000367.1-201ENST00000452711 1766 ntBASIC4.58□□□□□ -1.68
SGO1Q5FBB7 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 MTND4P10-201ENST00000446199 1363 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AC025263.3-201ENST00000622965 1396 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AC109780.1-201ENST00000451768 1344 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AC022031.1-201ENST00000585985 2593 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AC092642.1-201ENST00000392417 425 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AF228730.1-201ENST00000397972 663 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 DPPA2P3-201ENST00000411853 655 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 RPL6P29-201ENST00000414863 865 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 OR4K6P-201ENST00000416478 897 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 OR2AM1P-201ENST00000422137 422 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AL009174.1-201ENST00000426577 416 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 CNOT7P1-201ENST00000429006 852 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 RPL12P28-201ENST00000430852 489 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 NANOGP2-201ENST00000435391 727 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AL357520.1-201ENST00000441557 453 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 APOOP2-201ENST00000461561 539 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 CCDC75P1-201ENST00000469247 791 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AC074386.1-201ENST00000476560 767 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AC105233.1-201ENST00000498840 781 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AC113347.3-201ENST00000509113 148 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AC112673.1-201ENST00000513168 575 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 RNU6-416P-201ENST00000516265 103 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 RN7SKP283-201ENST00000517197 270 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AC044913.1-201ENST00000557200 430 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AC009097.3-201ENST00000563557 1018 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 MIR5708-201ENST00000579723 85 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AC123786.2-201ENST00000603459 275 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AL357094.1-201ENST00000603845 844 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 COX6CP4-201ENST00000605798 228 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AP000238.1-201ENST00000608759 426 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AL592148.2-201ENST00000612210 372 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AC116447.1-201ENST00000613153 453 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AC079395.3-201ENST00000615161 484 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AC018926.3-201ENST00000618841 406 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AC087821.2-201ENST00000637086 450 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AC119744.1-201ENST00000454746 1715 ntBASIC4.57□□□□□ -1.68
SGO1Q5FBB7 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SGO1Q5FBB7 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SGO1Q5FBB7 NCLP2-201ENST00000416078 1462 ntBASIC4.56□□□□□ -1.68
SGO1Q5FBB7 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SGO1Q5FBB7 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SGO1Q5FBB7 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SGO1Q5FBB7 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SGO1Q5FBB7 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SGO1Q5FBB7 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SGO1Q5FBB7 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SGO1Q5FBB7 RNA5SP191-201ENST00000362585 102 ntBASIC4.56□□□□□ -1.68
SGO1Q5FBB7 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.56□□□□□ -1.68
SGO1Q5FBB7 RNU4-34P-201ENST00000410431 124 ntBASIC4.56□□□□□ -1.68
SGO1Q5FBB7 AC114755.2-201ENST00000413520 361 ntBASIC4.56□□□□□ -1.68
SGO1Q5FBB7 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.56□□□□□ -1.68
SGO1Q5FBB7 RPS24P7-201ENST00000416921 246 ntBASIC4.56□□□□□ -1.68
SGO1Q5FBB7 AL356320.2-201ENST00000417263 507 ntBASIC4.56□□□□□ -1.68
SGO1Q5FBB7 AC234782.4-201ENST00000417646 1048 ntBASIC4.56□□□□□ -1.68
SGO1Q5FBB7 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.56□□□□□ -1.68
SGO1Q5FBB7 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.56□□□□□ -1.68
SGO1Q5FBB7 RPL7P57-201ENST00000423238 740 ntBASIC4.56□□□□□ -1.68
SGO1Q5FBB7 AL645608.4-201ENST00000423619 154 ntBASIC4.56□□□□□ -1.68
SGO1Q5FBB7 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.56□□□□□ -1.68
SGO1Q5FBB7 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms