Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RPS17P2-201ENST00000461663 408 ntBASIC5.1□□□□□ -1.59
CCDC38Q502W7 AC026348.1-201ENST00000462549 1053 ntBASIC5.1□□□□□ -1.59
CCDC38Q502W7 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC38Q502W7 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC38Q502W7 COPS8P2-201ENST00000473228 627 ntBASIC5.1□□□□□ -1.59
CCDC38Q502W7 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC38Q502W7 RPS18P6-201ENST00000476880 458 ntBASIC5.1□□□□□ -1.59
CCDC38Q502W7 AC011037.1-201ENST00000483964 558 ntBASIC5.1□□□□□ -1.59
CCDC38Q502W7 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC38Q502W7 AC010350.1-201ENST00000504908 231 ntBASIC5.1□□□□□ -1.59
CCDC38Q502W7 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC38Q502W7 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC38Q502W7 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC38Q502W7 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.1□□□□□ -1.59
CCDC38Q502W7 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.1□□□□□ -1.59
CCDC38Q502W7 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC38Q502W7 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.1□□□□□ -1.59
CCDC38Q502W7 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC38Q502W7 AC023813.2-201ENST00000564321 469 ntBASIC5.1□□□□□ -1.59
CCDC38Q502W7 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC38Q502W7 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC38Q502W7 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC38Q502W7 AC095055.1-201ENST00000603472 1113 ntBASIC5.1□□□□□ -1.59
CCDC38Q502W7 AC069545.1-201ENST00000605671 358 ntBASIC5.1□□□□□ -1.59
CCDC38Q502W7 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC38Q502W7 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC38Q502W7 AL359535.1-201ENST00000612100 1087 ntBASIC5.1□□□□□ -1.59
CCDC38Q502W7 AC024257.5-201ENST00000612739 531 ntBASIC5.1□□□□□ -1.59
CCDC38Q502W7 AL158196.1-201ENST00000616786 434 ntBASIC5.1□□□□□ -1.59
CCDC38Q502W7 AC131238.1-201ENST00000617135 328 ntBASIC5.1□□□□□ -1.59
CCDC38Q502W7 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC38Q502W7 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CCDC38Q502W7 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CCDC38Q502W7 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC38Q502W7 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC38Q502W7 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CCDC38Q502W7 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC38Q502W7 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC38Q502W7 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC38Q502W7 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC38Q502W7 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC38Q502W7 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC38Q502W7 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC38Q502W7 AC091046.3-201ENST00000631455 1574 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC38Q502W7 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC38Q502W7 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
CCDC38Q502W7 DCAF13P3-201ENST00000561147 1334 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC38Q502W7 OR10J6P-201ENST00000289731 930 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC38Q502W7 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC38Q502W7 RN7SKP104-201ENST00000362605 328 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 SNORA73.1-201ENST00000363107 205 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC38Q502W7 RNU6-1293P-201ENST00000384077 107 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 SNORD116-23-201ENST00000384645 92 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC38Q502W7 SNORA77-201ENST00000408716 125 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 QRSL1P2-201ENST00000418582 964 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 AC008280.1-201ENST00000418851 412 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC38Q502W7 AC007435.1-201ENST00000421086 415 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC38Q502W7 HMGB3P5-201ENST00000428894 612 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 AC010881.1-201ENST00000433830 235 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC38Q502W7 LYPLA1P1-201ENST00000434514 622 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC38Q502W7 USP9YP22-201ENST00000438971 294 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 AC092393.1-201ENST00000439625 742 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 AC007327.1-201ENST00000447461 264 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 HMGN3P1-201ENST00000453847 193 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC38Q502W7 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC38Q502W7 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CCDC38Q502W7 HMGB3P13-201ENST00000511263 607 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC38Q502W7 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.09□□□□□ -1.59
CCDC38Q502W7 MYL12AP1-201ENST00000518490 515 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 AC022790.1-201ENST00000522872 204 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC38Q502W7 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC38Q502W7 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC38Q502W7 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.09□□□□□ -1.59
CCDC38Q502W7 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC38Q502W7 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC38Q502W7 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC38Q502W7 MIR1269B-201ENST00000580405 75 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC38Q502W7 AC234772.3-201ENST00000602277 528 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 MTND3P19-201ENST00000603825 345 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 AC098935.2-201ENST00000604222 466 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 SUMO2P15-201ENST00000604285 278 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 RNU6-156P-201ENST00000621869 107 ntBASIC5.09□□□□□ -1.59
CCDC38Q502W7 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC38Q502W7 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC38Q502W7 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
CCDC38Q502W7 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC38Q502W7 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms