Protein–RNA interactions for Protein: Q08170

SRSF4, Serine/arginine-rich splicing factor 4, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4Q08170 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SRSF4Q08170 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SRSF4Q08170 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SRSF4Q08170 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SRSF4Q08170 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SRSF4Q08170 Y_RNA.70-201ENST00000362886 110 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 RN7SKP124-201ENST00000364730 341 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 SNORA70-201ENST00000384436 135 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 RNY3P10-201ENST00000384764 102 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 PIGPP2-201ENST00000411569 458 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 ATG4AP1-201ENST00000416893 538 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 AC019050.1-201ENST00000418508 492 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 UBTFL3-201ENST00000418934 1024 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.63□□□□□ -1.67
SRSF4Q08170 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.63□□□□□ -1.67
SRSF4Q08170 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.63□□□□□ -1.67
SRSF4Q08170 AC007435.1-201ENST00000421086 415 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 AC104333.2-201ENST00000422630 192 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 GTF2IP23-201ENST00000423746 351 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.63□□□□□ -1.67
SRSF4Q08170 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.63□□□□□ -1.67
SRSF4Q08170 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.63□□□□□ -1.67
SRSF4Q08170 AL390119.1-201ENST00000440329 312 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.63□□□□□ -1.67
SRSF4Q08170 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SRSF4Q08170 AL596266.1-201ENST00000448132 400 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.63□□□□□ -1.67
SRSF4Q08170 AL606490.1-201ENST00000452266 765 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 OR6C5P-201ENST00000452388 923 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.63□□□□□ -1.67
SRSF4Q08170 RNA5SP269-201ENST00000459032 137 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.63□□□□□ -1.67
SRSF4Q08170 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.63□□□□□ -1.67
SRSF4Q08170 UBTFL6-201ENST00000477929 1024 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.63□□□□□ -1.67
SRSF4Q08170 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.63□□□□□ -1.67
SRSF4Q08170 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.63□□□□□ -1.67
SRSF4Q08170 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.63□□□□□ -1.67
SRSF4Q08170 AC074255.1-201ENST00000511259 501 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 AC116347.2-201ENST00000514912 523 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 AL671862.1-201ENST00000515851 349 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.63□□□□□ -1.67
SRSF4Q08170 CDC42P3-201ENST00000518493 633 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 SMARCE1P4-201ENST00000523647 241 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.63□□□□□ -1.67
SRSF4Q08170 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SRSF4Q08170 AC006349.1-201ENST00000555526 235 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 ANP32BP3-201ENST00000559213 706 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 ATP5F1P7-201ENST00000567330 760 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 MIR4700-201ENST00000578311 74 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.63□□□□□ -1.67
SRSF4Q08170 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.63□□□□□ -1.67
SRSF4Q08170 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SRSF4Q08170 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.63□□□□□ -1.67
SRSF4Q08170 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.63□□□□□ -1.67
SRSF4Q08170 AP005137.2-201ENST00000609238 400 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 AL139099.4-201ENST00000614802 114 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 MIR7844-201ENST00000616161 122 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 U4.5-201ENST00000617137 123 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 RN7SL544P-201ENST00000617232 284 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 RN7SL763P-201ENST00000620922 284 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 AC016717.3-201ENST00000624730 554 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.63□□□□□ -1.67
SRSF4Q08170 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SRSF4Q08170 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SRSF4Q08170 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SRSF4Q08170 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SRSF4Q08170 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SRSF4Q08170 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.63□□□□□ -1.67
SRSF4Q08170 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
SRSF4Q08170 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SRSF4Q08170 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SRSF4Q08170 AC104964.3-201ENST00000606115 2860 ntBASIC4.63□□□□□ -1.67
SRSF4Q08170 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
SRSF4Q08170 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SRSF4Q08170 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SRSF4Q08170 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SRSF4Q08170 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SRSF4Q08170 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SRSF4Q08170 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.62□□□□□ -1.67
SRSF4Q08170 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
SRSF4Q08170 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
SRSF4Q08170 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SRSF4Q08170 GAPDHP24-201ENST00000328713 983 ntBASIC4.62□□□□□ -1.67
SRSF4Q08170 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SRSF4Q08170 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.62□□□□□ -1.67
SRSF4Q08170 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SRSF4Q08170 RNU6-259P-201ENST00000383999 107 ntBASIC4.62□□□□□ -1.67
SRSF4Q08170 MIR142-201ENST00000384835 87 ntBASIC4.62□□□□□ -1.67
SRSF4Q08170 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SRSF4Q08170 MIR1271-201ENST00000408537 86 ntBASIC4.62□□□□□ -1.67
SRSF4Q08170 RNU4-34P-201ENST00000410431 124 ntBASIC4.62□□□□□ -1.67
SRSF4Q08170 RN7SKP29-201ENST00000410957 272 ntBASIC4.62□□□□□ -1.67
SRSF4Q08170 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.62□□□□□ -1.67
SRSF4Q08170 USP9YP6-201ENST00000413550 854 ntBASIC4.62□□□□□ -1.67
SRSF4Q08170 AC007738.1-201ENST00000413892 348 ntBASIC4.62□□□□□ -1.67
SRSF4Q08170 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.62□□□□□ -1.67
SRSF4Q08170 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.62□□□□□ -1.67
SRSF4Q08170 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms