Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LIM2P55344 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
LIM2P55344 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LIM2P55344 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LIM2P55344 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
LIM2P55344 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
LIM2P55344 RNU6-244P-201ENST00000391028 104 ntBASIC3.93□□□□□ -1.78
LIM2P55344 AC093719.1-202ENST00000392735 373 ntBASIC3.93□□□□□ -1.78
LIM2P55344 RPS24P12-201ENST00000402084 394 ntBASIC3.93□□□□□ -1.78
LIM2P55344 TATDN1P1-201ENST00000414123 891 ntBASIC3.93□□□□□ -1.78
LIM2P55344 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.93□□□□□ -1.78
LIM2P55344 AC004552.1-201ENST00000419089 348 ntBASIC3.93□□□□□ -1.78
LIM2P55344 AC048351.1-201ENST00000420064 602 ntBASIC3.93□□□□□ -1.78
LIM2P55344 ARL2BPP3-201ENST00000421226 480 ntBASIC3.93□□□□□ -1.78
LIM2P55344 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.93□□□□□ -1.78
LIM2P55344 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.93□□□□□ -1.78
LIM2P55344 RPS24P8-201ENST00000431490 402 ntBASIC3.93□□□□□ -1.78
LIM2P55344 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.93□□□□□ -1.78
LIM2P55344 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.93□□□□□ -1.78
LIM2P55344 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.93□□□□□ -1.78
LIM2P55344 RAD23BP3-201ENST00000454157 1152 ntBASIC3.93□□□□□ -1.78
LIM2P55344 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.93□□□□□ -1.78
LIM2P55344 RPS26P3-201ENST00000470205 348 ntBASIC3.93□□□□□ -1.78
LIM2P55344 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
LIM2P55344 AC006517.1-201ENST00000480485 328 ntBASIC3.93□□□□□ -1.78
LIM2P55344 AC090543.2-201ENST00000483963 348 ntBASIC3.93□□□□□ -1.78
LIM2P55344 AC004057.1-201ENST00000485827 348 ntBASIC3.93□□□□□ -1.78
LIM2P55344 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.93□□□□□ -1.78
LIM2P55344 RPL23AP73-201ENST00000492507 471 ntBASIC3.93□□□□□ -1.78
LIM2P55344 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.93□□□□□ -1.78
LIM2P55344 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.93□□□□□ -1.78
LIM2P55344 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.93□□□□□ -1.78
LIM2P55344 AC004923.2-201ENST00000529649 369 ntBASIC3.93□□□□□ -1.78
LIM2P55344 AC093014.1-201ENST00000548926 724 ntBASIC3.93□□□□□ -1.78
LIM2P55344 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.93□□□□□ -1.78
LIM2P55344 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.93□□□□□ -1.78
LIM2P55344 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.93□□□□□ -1.78
LIM2P55344 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.93□□□□□ -1.78
LIM2P55344 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.93□□□□□ -1.78
LIM2P55344 AC006116.5-201ENST00000591936 559 ntBASIC3.93□□□□□ -1.78
LIM2P55344 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
LIM2P55344 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.93□□□□□ -1.78
LIM2P55344 AC079610.2-201ENST00000604818 690 ntBASIC3.93□□□□□ -1.78
LIM2P55344 AL450270.1-201ENST00000606160 391 ntBASIC3.93□□□□□ -1.78
LIM2P55344 AL391834.1-201ENST00000609609 560 ntBASIC3.93□□□□□ -1.78
LIM2P55344 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.93□□□□□ -1.78
LIM2P55344 AC083809.1-201ENST00000615051 472 ntBASIC3.93□□□□□ -1.78
LIM2P55344 AC006338.2-201ENST00000616864 791 ntBASIC3.93□□□□□ -1.78
LIM2P55344 AP004607.9-201ENST00000618202 316 ntBASIC3.93□□□□□ -1.78
LIM2P55344 AC015908.5-201ENST00000623289 343 ntBASIC3.93□□□□□ -1.78
LIM2P55344 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
LIM2P55344 AC020923.1-201ENST00000624021 917 ntBASIC3.93□□□□□ -1.78
LIM2P55344 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.93□□□□□ -1.78
LIM2P55344 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.93□□□□□ -1.78
LIM2P55344 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.93□□□□□ -1.78
LIM2P55344 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
LIM2P55344 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.93□□□□□ -1.78
LIM2P55344 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.93□□□□□ -1.78
LIM2P55344 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.93□□□□□ -1.78
LIM2P55344 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
LIM2P55344 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.93□□□□□ -1.78
LIM2P55344 AC093535.2-201ENST00000624769 2326 ntBASIC3.93□□□□□ -1.78
LIM2P55344 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.93□□□□□ -1.78
LIM2P55344 AC009951.1-201ENST00000623674 2614 ntBASIC3.92□□□□□ -1.78
LIM2P55344 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LIM2P55344 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
LIM2P55344 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
LIM2P55344 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.92□□□□□ -1.78
LIM2P55344 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
LIM2P55344 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
LIM2P55344 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.92□□□□□ -1.78
LIM2P55344 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
LIM2P55344 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LIM2P55344 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.92□□□□□ -1.78
LIM2P55344 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LIM2P55344 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LIM2P55344 METTL21EP-201ENST00000298105 713 ntBASIC3.92□□□□□ -1.78
LIM2P55344 AP000357.1-201ENST00000409926 1165 ntBASIC3.92□□□□□ -1.78
LIM2P55344 RNA5SP306-201ENST00000411087 107 ntBASIC3.92□□□□□ -1.78
LIM2P55344 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.92□□□□□ -1.78
LIM2P55344 COX6CP17-201ENST00000421389 185 ntBASIC3.92□□□□□ -1.78
LIM2P55344 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.92□□□□□ -1.78
LIM2P55344 COX6CP15-201ENST00000426313 211 ntBASIC3.92□□□□□ -1.78
LIM2P55344 AL035458.1-201ENST00000433096 585 ntBASIC3.92□□□□□ -1.78
LIM2P55344 AL353597.2-202ENST00000434901 373 ntBASIC3.92□□□□□ -1.78
LIM2P55344 ELOCP10-201ENST00000440624 327 ntBASIC3.92□□□□□ -1.78
LIM2P55344 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.92□□□□□ -1.78
LIM2P55344 PTMAP3-201ENST00000447474 330 ntBASIC3.92□□□□□ -1.78
LIM2P55344 AC092685.1-201ENST00000447960 1243 ntBASIC3.92□□□□□ -1.78
LIM2P55344 AC017099.1-201ENST00000448261 1028 ntBASIC3.92□□□□□ -1.78
LIM2P55344 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.92□□□□□ -1.78
LIM2P55344 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
LIM2P55344 AC005912.1-201ENST00000495392 255 ntBASIC3.92□□□□□ -1.78
LIM2P55344 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC3.92□□□□□ -1.78
LIM2P55344 AC093824.1-201ENST00000508796 343 ntBASIC3.92□□□□□ -1.78
LIM2P55344 RFPL4AP5-201ENST00000514977 504 ntBASIC3.92□□□□□ -1.78
LIM2P55344 SNORA31.9-201ENST00000516429 84 ntBASIC3.92□□□□□ -1.78
LIM2P55344 RNU6-467P-201ENST00000517027 110 ntBASIC3.92□□□□□ -1.78
LIM2P55344 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.92□□□□□ -1.78
LIM2P55344 IGKV2D-10-201ENST00000520194 281 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms