Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH4P55283 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH4P55283 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.25□□□□□ -1.73
CDH4P55283 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH4P55283 AC135803.1-201ENST00000608748 565 ntBASIC4.25□□□□□ -1.73
CDH4P55283 MIR7151-201ENST00000617477 60 ntBASIC4.25□□□□□ -1.73
CDH4P55283 AL731566.2-201ENST00000618971 317 ntBASIC4.25□□□□□ -1.73
CDH4P55283 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH4P55283 MIR7154-201ENST00000620673 73 ntBASIC4.25□□□□□ -1.73
CDH4P55283 AC112484.5-201ENST00000624189 228 ntBASIC4.25□□□□□ -1.73
CDH4P55283 AP005264.7-201ENST00000625003 745 ntBASIC4.25□□□□□ -1.73
CDH4P55283 AC055839.1-201ENST00000634467 498 ntBASIC4.25□□□□□ -1.73
CDH4P55283 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
CDH4P55283 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH4P55283 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH4P55283 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.25□□□□□ -1.73
CDH4P55283 ERCC6-202ENST00000374127 1782 ntBASIC4.25□□□□□ -1.73
CDH4P55283 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDH4P55283 AC017104.4-201ENST00000636283 1592 ntBASIC4.24□□□□□ -1.73
CDH4P55283 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDH4P55283 MFSD8-220ENST00000641243 1422 ntBASIC4.24□□□□□ -1.73
CDH4P55283 AC068254.2-201ENST00000623938 3577 ntBASIC4.24□□□□□ -1.73
CDH4P55283 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.24□□□□□ -1.73
CDH4P55283 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDH4P55283 OR11H4-201ENST00000315409 1082 ntBASIC4.24□□□□□ -1.73
CDH4P55283 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CDH4P55283 RN7SKP227-201ENST00000364445 330 ntBASIC4.24□□□□□ -1.73
CDH4P55283 RNU11-4P-201ENST00000391149 133 ntBASIC4.24□□□□□ -1.73
CDH4P55283 AL356095.1-201ENST00000417217 199 ntBASIC4.24□□□□□ -1.73
CDH4P55283 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.24□□□□□ -1.73
CDH4P55283 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.24□□□□□ -1.73
CDH4P55283 AC023512.1-201ENST00000444513 499 ntBASIC4.24□□□□□ -1.73
CDH4P55283 RPL38P1-201ENST00000460914 211 ntBASIC4.24□□□□□ -1.73
CDH4P55283 RPL7P48-201ENST00000461513 746 ntBASIC4.24□□□□□ -1.73
CDH4P55283 PRELID3BP7-201ENST00000503606 469 ntBASIC4.24□□□□□ -1.73
CDH4P55283 HPRT1P2-201ENST00000505250 544 ntBASIC4.24□□□□□ -1.73
CDH4P55283 PPBPP1-201ENST00000510807 373 ntBASIC4.24□□□□□ -1.73
CDH4P55283 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH4P55283 MIR2116-201ENST00000517221 80 ntBASIC4.24□□□□□ -1.73
CDH4P55283 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH4P55283 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH4P55283 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.24□□□□□ -1.73
CDH4P55283 AC007224.1-201ENST00000564410 144 ntBASIC4.24□□□□□ -1.73
CDH4P55283 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.24□□□□□ -1.73
CDH4P55283 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.24□□□□□ -1.73
CDH4P55283 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.24□□□□□ -1.73
CDH4P55283 MIMT1-201ENST00000597105 1050 ntBASIC4.24□□□□□ -1.73
CDH4P55283 AC090525.3-201ENST00000605601 189 ntBASIC4.24□□□□□ -1.73
CDH4P55283 MIR432-201ENST00000606207 94 ntBASIC4.24□□□□□ -1.73
CDH4P55283 AC012557.1-201ENST00000607115 611 ntBASIC4.24□□□□□ -1.73
CDH4P55283 RNU4-89P-201ENST00000607443 133 ntBASIC4.24□□□□□ -1.73
CDH4P55283 AC064801.1-201ENST00000612025 407 ntBASIC4.24□□□□□ -1.73
CDH4P55283 AC009318.3-201ENST00000616916 503 ntBASIC4.24□□□□□ -1.73
CDH4P55283 AL356121.2-201ENST00000624715 780 ntBASIC4.24□□□□□ -1.73
CDH4P55283 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CDH4P55283 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CDH4P55283 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDH4P55283 PNPT1P2-201ENST00000456768 2050 ntBASIC4.23□□□□□ -1.73
CDH4P55283 AL049555.1-201ENST00000562834 1933 ntBASIC4.23□□□□□ -1.73
CDH4P55283 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.23□□□□□ -1.73
CDH4P55283 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CDH4P55283 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CDH4P55283 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CDH4P55283 RNA5SP130-201ENST00000364431 114 ntBASIC4.23□□□□□ -1.73
CDH4P55283 RNU1-13P-201ENST00000384499 162 ntBASIC4.23□□□□□ -1.73
CDH4P55283 OR8G2P-201ENST00000412796 908 ntBASIC4.23□□□□□ -1.73
CDH4P55283 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.23□□□□□ -1.73
CDH4P55283 AL138785.1-201ENST00000425821 331 ntBASIC4.23□□□□□ -1.73
CDH4P55283 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.23□□□□□ -1.73
CDH4P55283 AL356276.2-201ENST00000435919 558 ntBASIC4.23□□□□□ -1.73
CDH4P55283 AC245517.2-201ENST00000442890 346 ntBASIC4.23□□□□□ -1.73
CDH4P55283 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.23□□□□□ -1.73
CDH4P55283 MYL12AP1-201ENST00000518490 515 ntBASIC4.23□□□□□ -1.73
CDH4P55283 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CDH4P55283 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.23□□□□□ -1.73
CDH4P55283 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.23□□□□□ -1.73
CDH4P55283 AC124068.1-201ENST00000563131 678 ntBASIC4.23□□□□□ -1.73
CDH4P55283 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.23□□□□□ -1.73
CDH4P55283 MIR4716-201ENST00000579628 84 ntBASIC4.23□□□□□ -1.73
CDH4P55283 MIR6867-201ENST00000610636 67 ntBASIC4.23□□□□□ -1.73
CDH4P55283 AC078899.5-201ENST00000612475 178 ntBASIC4.23□□□□□ -1.73
CDH4P55283 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDH4P55283 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.23□□□□□ -1.73
CDH4P55283 SNX18P1Y-201ENST00000616231 511 ntBASIC4.23□□□□□ -1.73
CDH4P55283 ZYXP1-201ENST00000617638 118 ntBASIC4.23□□□□□ -1.73
CDH4P55283 AC067852.7-201ENST00000623270 535 ntBASIC4.23□□□□□ -1.73
CDH4P55283 AP006248.2-201ENST00000623309 592 ntBASIC4.23□□□□□ -1.73
CDH4P55283 AC116563.2-201ENST00000624751 535 ntBASIC4.23□□□□□ -1.73
CDH4P55283 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDH4P55283 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDH4P55283 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDH4P55283 AC096656.1-201ENST00000623826 1364 ntBASIC4.23□□□□□ -1.73
CDH4P55283 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDH4P55283 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDH4P55283 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
CDH4P55283 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDH4P55283 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDH4P55283 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CDH4P55283 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH4P55283 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms