Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.78□□□□□ -1.48
EPHB3P54753 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.78□□□□□ -1.48
EPHB3P54753 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.78□□□□□ -1.48
EPHB3P54753 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.78□□□□□ -1.48
EPHB3P54753 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.78□□□□□ -1.48
EPHB3P54753 HMGB1P16-201ENST00000447155 540 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.78□□□□□ -1.48
EPHB3P54753 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.78□□□□□ -1.48
EPHB3P54753 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.78□□□□□ -1.48
EPHB3P54753 RPS4XP12-201ENST00000461747 709 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.78□□□□□ -1.48
EPHB3P54753 AC117522.3-201ENST00000507974 584 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC5.78□□□□□ -1.48
EPHB3P54753 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 RNU6-358P-201ENST00000516564 75 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.78□□□□□ -1.48
EPHB3P54753 OR5AK1P-201ENST00000524837 922 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 AP002453.2-201ENST00000533503 320 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.78□□□□□ -1.48
EPHB3P54753 CR383656.6-201ENST00000550518 394 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.78□□□□□ -1.48
EPHB3P54753 AL442663.2-201ENST00000554385 511 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.78□□□□□ -1.48
EPHB3P54753 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.78□□□□□ -1.48
EPHB3P54753 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.78□□□□□ -1.48
EPHB3P54753 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.78□□□□□ -1.48
EPHB3P54753 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.78□□□□□ -1.48
EPHB3P54753 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.78□□□□□ -1.48
EPHB3P54753 VN1R79P-201ENST00000593540 513 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 AC131902.3-201ENST00000611767 581 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 AC069209.1-201ENST00000619282 651 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
EPHB3P54753 AC019278.1-201ENST00000623516 479 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.78□□□□□ -1.48
EPHB3P54753 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.78□□□□□ -1.48
EPHB3P54753 OR52B5P-202ENST00000641118 1110 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
EPHB3P54753 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
EPHB3P54753 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
EPHB3P54753 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
EPHB3P54753 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
EPHB3P54753 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
EPHB3P54753 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
EPHB3P54753 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
EPHB3P54753 Z95114.1-201ENST00000624264 14574 ntBASIC5.78□□□□□ -1.48
EPHB3P54753 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
EPHB3P54753 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.77□□□□□ -1.48
EPHB3P54753 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
EPHB3P54753 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.77□□□□□ -1.49
EPHB3P54753 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
EPHB3P54753 AL121886.1-201ENST00000358609 435 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 MIR133B-201ENST00000362210 119 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 RNA5SP326-201ENST00000363209 110 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 RNA5SP507-201ENST00000363603 121 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 SNORA58B-201ENST00000364259 136 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 Y_RNA.263-201ENST00000364659 114 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 Y_RNA.372-201ENST00000365599 102 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 GNG5P2-201ENST00000372054 207 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.77□□□□□ -1.49
EPHB3P54753 SNORA70.9-201ENST00000384370 135 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 SNORA67-201ENST00000384423 137 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 RNA5SP339-201ENST00000390987 122 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 CCNG1P1-201ENST00000406783 885 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 RN7SKP279-201ENST00000411383 298 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 METTL15P3-201ENST00000415522 1221 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 AF228730.4-201ENST00000421457 183 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 AC007394.1-201ENST00000421941 531 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.77□□□□□ -1.49
EPHB3P54753 RPS11P7-201ENST00000442125 465 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 MTND4P19-201ENST00000446659 478 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 AC239798.3-201ENST00000454459 408 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 RBM43P1-201ENST00000476891 1081 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.77□□□□□ -1.49
EPHB3P54753 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
EPHB3P54753 AC008953.1-201ENST00000497334 318 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.77□□□□□ -1.49
EPHB3P54753 MTND6P2-201ENST00000512226 524 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 RNU6-1153P-201ENST00000516760 105 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
EPHB3P54753 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.77□□□□□ -1.49
EPHB3P54753 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.77□□□□□ -1.49
EPHB3P54753 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.77□□□□□ -1.49
EPHB3P54753 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.77□□□□□ -1.49
EPHB3P54753 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.77□□□□□ -1.49
EPHB3P54753 AP000942.4-201ENST00000604811 241 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 AC008536.2-201ENST00000607284 349 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 AC126915.2-201ENST00000610957 190 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 RPSAP73-201ENST00000614820 330 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 MIR7155-201ENST00000615925 56 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 AL031658.2-201ENST00000616850 651 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.77□□□□□ -1.49
EPHB3P54753 AC138649.3-201ENST00000622154 254 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 AC124864.2-201ENST00000624736 186 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.77□□□□□ -1.49
EPHB3P54753 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.77□□□□□ -1.49
EPHB3P54753 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.77□□□□□ -1.49
EPHB3P54753 AC024614.3-201ENST00000637860 256 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms