Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PDX1P52945 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.4□□□□□ -1.71
PDX1P52945 AC110760.3-202ENST00000515177 371 ntBASIC4.4□□□□□ -1.71
PDX1P52945 RN7SKP46-201ENST00000515942 234 ntBASIC4.4□□□□□ -1.71
PDX1P52945 SNORA19.3-201ENST00000516165 130 ntBASIC4.4□□□□□ -1.71
PDX1P52945 RNU6-347P-201ENST00000516658 105 ntBASIC4.4□□□□□ -1.71
PDX1P52945 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.4□□□□□ -1.71
PDX1P52945 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.4□□□□□ -1.71
PDX1P52945 AP000827.1-201ENST00000527814 258 ntBASIC4.4□□□□□ -1.71
PDX1P52945 CYCSP29-201ENST00000533731 318 ntBASIC4.4□□□□□ -1.71
PDX1P52945 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.4□□□□□ -1.71
PDX1P52945 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.4□□□□□ -1.71
PDX1P52945 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PDX1P52945 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PDX1P52945 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.4□□□□□ -1.71
PDX1P52945 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.4□□□□□ -1.71
PDX1P52945 AC007224.1-201ENST00000564410 144 ntBASIC4.4□□□□□ -1.71
PDX1P52945 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.4□□□□□ -1.71
PDX1P52945 RNF138P2-201ENST00000603490 592 ntBASIC4.4□□□□□ -1.71
PDX1P52945 AP002802.2-201ENST00000605877 235 ntBASIC4.4□□□□□ -1.71
PDX1P52945 MIR7973-1-201ENST00000614683 76 ntBASIC4.4□□□□□ -1.71
PDX1P52945 AC022079.2-201ENST00000619739 566 ntBASIC4.4□□□□□ -1.71
PDX1P52945 AP000843.1-201ENST00000624880 701 ntBASIC4.4□□□□□ -1.71
PDX1P52945 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.4□□□□□ -1.71
PDX1P52945 AL031119.1-201ENST00000404707 1879 ntBASIC4.4□□□□□ -1.71
PDX1P52945 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PDX1P52945 AL627171.1-201ENST00000618845 1308 ntBASIC4.4□□□□□ -1.71
PDX1P52945 AC108467.2-201ENST00000617640 1597 ntBASIC4.4□□□□□ -1.71
PDX1P52945 AC022893.2-201ENST00000564832 3296 ntBASIC4.4□□□□□ -1.71
PDX1P52945 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDX1P52945 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PDX1P52945 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDX1P52945 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.39□□□□□ -1.71
PDX1P52945 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDX1P52945 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDX1P52945 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDX1P52945 RNA5SP388-201ENST00000362584 119 ntBASIC4.39□□□□□ -1.71
PDX1P52945 RNU5E-10P-201ENST00000363506 118 ntBASIC4.39□□□□□ -1.71
PDX1P52945 U6.112-201ENST00000384129 70 ntBASIC4.39□□□□□ -1.71
PDX1P52945 SNORA70C-201ENST00000384538 135 ntBASIC4.39□□□□□ -1.71
PDX1P52945 RNU6-298P-201ENST00000390888 96 ntBASIC4.39□□□□□ -1.71
PDX1P52945 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PDX1P52945 Z98745.1-201ENST00000402553 494 ntBASIC4.39□□□□□ -1.71
PDX1P52945 MTATP6P31-201ENST00000406985 692 ntBASIC4.39□□□□□ -1.71
PDX1P52945 MTND4P11-201ENST00000417020 1058 ntBASIC4.39□□□□□ -1.71
PDX1P52945 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.39□□□□□ -1.71
PDX1P52945 RPS29P17-201ENST00000430795 166 ntBASIC4.39□□□□□ -1.71
PDX1P52945 YWHAEP5-201ENST00000431545 765 ntBASIC4.39□□□□□ -1.71
PDX1P52945 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.39□□□□□ -1.71
PDX1P52945 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.39□□□□□ -1.71
PDX1P52945 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.39□□□□□ -1.71
PDX1P52945 AC122718.1-201ENST00000439448 744 ntBASIC4.39□□□□□ -1.71
PDX1P52945 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDX1P52945 RPS26P30-201ENST00000443431 335 ntBASIC4.39□□□□□ -1.71
PDX1P52945 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.39□□□□□ -1.71
PDX1P52945 FAM133DP-201ENST00000464802 691 ntBASIC4.39□□□□□ -1.71
PDX1P52945 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.39□□□□□ -1.71
PDX1P52945 RPS4XP6-201ENST00000477670 797 ntBASIC4.39□□□□□ -1.71
PDX1P52945 UBE2V1P12-201ENST00000503954 474 ntBASIC4.39□□□□□ -1.71
PDX1P52945 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDX1P52945 MTCO1P35-201ENST00000515270 228 ntBASIC4.39□□□□□ -1.71
PDX1P52945 snoU109.6-201ENST00000516831 118 ntBASIC4.39□□□□□ -1.71
PDX1P52945 AC021451.1-201ENST00000523498 1129 ntBASIC4.39□□□□□ -1.71
PDX1P52945 AC083923.1-201ENST00000523708 376 ntBASIC4.39□□□□□ -1.71
PDX1P52945 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDX1P52945 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.39□□□□□ -1.71
PDX1P52945 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.39□□□□□ -1.71
PDX1P52945 AC011477.5-201ENST00000586571 259 ntBASIC4.39□□□□□ -1.71
PDX1P52945 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.39□□□□□ -1.71
PDX1P52945 AL022067.1-201ENST00000602426 454 ntBASIC4.39□□□□□ -1.71
PDX1P52945 ARF4P1-201ENST00000605447 541 ntBASIC4.39□□□□□ -1.71
PDX1P52945 AL355816.2-201ENST00000610049 647 ntBASIC4.39□□□□□ -1.71
PDX1P52945 AC015726.3-201ENST00000624501 418 ntBASIC4.39□□□□□ -1.71
PDX1P52945 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.39□□□□□ -1.71
PDX1P52945 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDX1P52945 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDX1P52945 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDX1P52945 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
PDX1P52945 AL136164.3-201ENST00000624429 3978 ntBASIC4.38□□□□□ -1.71
PDX1P52945 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
PDX1P52945 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
PDX1P52945 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDX1P52945 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDX1P52945 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDX1P52945 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
PDX1P52945 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.38□□□□□ -1.71
PDX1P52945 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDX1P52945 ENSAP3-201ENST00000312710 333 ntBASIC4.38□□□□□ -1.71
PDX1P52945 SNORA37-201ENST00000384504 129 ntBASIC4.38□□□□□ -1.71
PDX1P52945 MCTS2P-201ENST00000394552 546 ntBASIC4.38□□□□□ -1.71
PDX1P52945 AC092638.1-201ENST00000411966 1275 ntBASIC4.38□□□□□ -1.71
PDX1P52945 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.38□□□□□ -1.71
PDX1P52945 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.38□□□□□ -1.71
PDX1P52945 MTCO2P23-201ENST00000425216 680 ntBASIC4.38□□□□□ -1.71
PDX1P52945 AP001324.1-201ENST00000428553 399 ntBASIC4.38□□□□□ -1.71
PDX1P52945 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.38□□□□□ -1.71
PDX1P52945 RPS3AP54-201ENST00000435535 734 ntBASIC4.38□□□□□ -1.71
PDX1P52945 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.38□□□□□ -1.71
PDX1P52945 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PDX1P52945 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms