Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CASP4P49662 MIR448-201ENST00000362131 111 ntBASIC4.37□□□□□ -1.71
CASP4P49662 SNORA60-201ENST00000362396 134 ntBASIC4.37□□□□□ -1.71
CASP4P49662 RNA5SP399-201ENST00000364003 117 ntBASIC4.37□□□□□ -1.71
CASP4P49662 SNORA70.2-201ENST00000364506 135 ntBASIC4.37□□□□□ -1.71
CASP4P49662 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CASP4P49662 RNU1-13P-201ENST00000384499 162 ntBASIC4.37□□□□□ -1.71
CASP4P49662 RNU4-6P-201ENST00000410804 122 ntBASIC4.37□□□□□ -1.71
CASP4P49662 RPL26P37-201ENST00000411983 438 ntBASIC4.37□□□□□ -1.71
CASP4P49662 AL512504.1-201ENST00000415494 778 ntBASIC4.37□□□□□ -1.71
CASP4P49662 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.37□□□□□ -1.71
CASP4P49662 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.37□□□□□ -1.71
CASP4P49662 MTCO1P57-201ENST00000432182 261 ntBASIC4.37□□□□□ -1.71
CASP4P49662 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.37□□□□□ -1.71
CASP4P49662 AC091390.1-201ENST00000433904 331 ntBASIC4.37□□□□□ -1.71
CASP4P49662 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.37□□□□□ -1.71
CASP4P49662 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.37□□□□□ -1.71
CASP4P49662 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.37□□□□□ -1.71
CASP4P49662 AL353748.1-201ENST00000440753 474 ntBASIC4.37□□□□□ -1.71
CASP4P49662 TPTE2P3-201ENST00000441562 1189 ntBASIC4.37□□□□□ -1.71
CASP4P49662 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.37□□□□□ -1.71
CASP4P49662 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.37□□□□□ -1.71
CASP4P49662 VTA1P2-201ENST00000520205 911 ntBASIC4.37□□□□□ -1.71
CASP4P49662 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.37□□□□□ -1.71
CASP4P49662 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.37□□□□□ -1.71
CASP4P49662 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.37□□□□□ -1.71
CASP4P49662 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.37□□□□□ -1.71
CASP4P49662 PARP1P2-201ENST00000556806 195 ntBASIC4.37□□□□□ -1.71
CASP4P49662 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.37□□□□□ -1.71
CASP4P49662 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.37□□□□□ -1.71
CASP4P49662 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.37□□□□□ -1.71
CASP4P49662 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.37□□□□□ -1.71
CASP4P49662 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.37□□□□□ -1.71
CASP4P49662 AC067931.1-201ENST00000624190 671 ntBASIC4.37□□□□□ -1.71
CASP4P49662 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.37□□□□□ -1.71
CASP4P49662 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.37□□□□□ -1.71
CASP4P49662 AC119674.1-212ENST00000641155 993 ntBASIC4.37□□□□□ -1.71
CASP4P49662 AC010300.1-201ENST00000600671 5134 ntBASIC4.37□□□□□ -1.71
CASP4P49662 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CASP4P49662 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.37□□□□□ -1.71
CASP4P49662 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CASP4P49662 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
CASP4P49662 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CASP4P49662 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.36□□□□□ -1.71
CASP4P49662 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CASP4P49662 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CASP4P49662 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
CASP4P49662 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.36□□□□□ -1.71
CASP4P49662 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.36□□□□□ -1.71
CASP4P49662 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.36□□□□□ -1.71
CASP4P49662 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CASP4P49662 RPL21P65-201ENST00000406094 466 ntBASIC4.36□□□□□ -1.71
CASP4P49662 RN7SKP222-201ENST00000410651 315 ntBASIC4.36□□□□□ -1.71
CASP4P49662 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.36□□□□□ -1.71
CASP4P49662 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.36□□□□□ -1.71
CASP4P49662 Z99127.2-201ENST00000441426 334 ntBASIC4.36□□□□□ -1.71
CASP4P49662 AL606490.8-201ENST00000441624 319 ntBASIC4.36□□□□□ -1.71
CASP4P49662 AL157827.1-201ENST00000447622 132 ntBASIC4.36□□□□□ -1.71
CASP4P49662 AL627224.1-201ENST00000448334 444 ntBASIC4.36□□□□□ -1.71
CASP4P49662 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.36□□□□□ -1.71
CASP4P49662 FABP3P2-201ENST00000453169 399 ntBASIC4.36□□□□□ -1.71
CASP4P49662 RN7SL860P-201ENST00000473738 223 ntBASIC4.36□□□□□ -1.71
CASP4P49662 PPM1AP1-201ENST00000502740 1135 ntBASIC4.36□□□□□ -1.71
CASP4P49662 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.36□□□□□ -1.71
CASP4P49662 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CASP4P49662 IGBP1P5-201ENST00000507524 1000 ntBASIC4.36□□□□□ -1.71
CASP4P49662 MTCO1P35-201ENST00000515270 228 ntBASIC4.36□□□□□ -1.71
CASP4P49662 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.36□□□□□ -1.71
CASP4P49662 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.36□□□□□ -1.71
CASP4P49662 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.36□□□□□ -1.71
CASP4P49662 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.36□□□□□ -1.71
CASP4P49662 GNRHR2P1-201ENST00000555315 631 ntBASIC4.36□□□□□ -1.71
CASP4P49662 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.36□□□□□ -1.71
CASP4P49662 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CASP4P49662 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CASP4P49662 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CASP4P49662 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CASP4P49662 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CASP4P49662 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.36□□□□□ -1.71
CASP4P49662 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CASP4P49662 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.35□□□□□ -1.71
CASP4P49662 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.35□□□□□ -1.71
CASP4P49662 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CASP4P49662 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CASP4P49662 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CASP4P49662 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CASP4P49662 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.35□□□□□ -1.71
CASP4P49662 RAB28P1-201ENST00000411517 641 ntBASIC4.35□□□□□ -1.71
CASP4P49662 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.35□□□□□ -1.71
CASP4P49662 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.35□□□□□ -1.71
CASP4P49662 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.35□□□□□ -1.71
CASP4P49662 RPL12P46-201ENST00000436610 195 ntBASIC4.35□□□□□ -1.71
CASP4P49662 MTCYBP12-201ENST00000440559 1134 ntBASIC4.35□□□□□ -1.71
CASP4P49662 AL353898.1-201ENST00000444055 238 ntBASIC4.35□□□□□ -1.71
CASP4P49662 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.35□□□□□ -1.71
CASP4P49662 AC114755.5-201ENST00000447760 831 ntBASIC4.35□□□□□ -1.71
CASP4P49662 MORF4L1P4-201ENST00000450245 976 ntBASIC4.35□□□□□ -1.71
CASP4P49662 NUTF2P7-201ENST00000453086 375 ntBASIC4.35□□□□□ -1.71
CASP4P49662 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.35□□□□□ -1.71
CASP4P49662 AL132838.2-201ENST00000492041 314 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms