Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 CHIAP3-201ENST00000423668 1133 ntBASIC3.58□□□□□ -1.84
SRP9P49458 COX6B1P7-201ENST00000430845 235 ntBASIC3.58□□□□□ -1.84
SRP9P49458 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.58□□□□□ -1.84
SRP9P49458 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.58□□□□□ -1.84
SRP9P49458 RPL23AP62-201ENST00000463396 453 ntBASIC3.58□□□□□ -1.84
SRP9P49458 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.58□□□□□ -1.84
SRP9P49458 RNU6-943P-201ENST00000516960 98 ntBASIC3.58□□□□□ -1.84
SRP9P49458 AC105233.3-201ENST00000531125 744 ntBASIC3.58□□□□□ -1.84
SRP9P49458 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.58□□□□□ -1.84
SRP9P49458 MIR4716-201ENST00000579628 84 ntBASIC3.58□□□□□ -1.84
SRP9P49458 MIR3939-201ENST00000582614 106 ntBASIC3.58□□□□□ -1.84
SRP9P49458 KPNA2P3-201ENST00000584190 848 ntBASIC3.58□□□□□ -1.84
SRP9P49458 AC011477.5-201ENST00000586571 259 ntBASIC3.58□□□□□ -1.84
SRP9P49458 MIR6716-201ENST00000613413 80 ntBASIC3.58□□□□□ -1.84
SRP9P49458 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SRP9P49458 MIR8059-201ENST00000620427 81 ntBASIC3.58□□□□□ -1.84
SRP9P49458 AC008013.2-202ENST00000637965 364 ntBASIC3.58□□□□□ -1.84
SRP9P49458 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SRP9P49458 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SRP9P49458 MFSD8-220ENST00000641243 1422 ntBASIC3.58□□□□□ -1.84
SRP9P49458 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.58□□□□□ -1.84
SRP9P49458 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.58□□□□□ -1.84
SRP9P49458 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SRP9P49458 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SRP9P49458 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SRP9P49458 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.58□□□□□ -1.84
SRP9P49458 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.57□□□□□ -1.84
SRP9P49458 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SRP9P49458 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SRP9P49458 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SRP9P49458 OR13C3-201ENST00000374781 1108 ntBASIC3.57□□□□□ -1.84
SRP9P49458 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SRP9P49458 AL049693.1-201ENST00000402760 611 ntBASIC3.57□□□□□ -1.84
SRP9P49458 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SRP9P49458 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.57□□□□□ -1.84
SRP9P49458 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SRP9P49458 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.57□□□□□ -1.84
SRP9P49458 IFNNP1-201ENST00000429219 553 ntBASIC3.57□□□□□ -1.84
SRP9P49458 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.57□□□□□ -1.84
SRP9P49458 BTF3P10-201ENST00000433415 495 ntBASIC3.57□□□□□ -1.84
SRP9P49458 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.57□□□□□ -1.84
SRP9P49458 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.57□□□□□ -1.84
SRP9P49458 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.57□□□□□ -1.84
SRP9P49458 NUTF2P3-201ENST00000448540 384 ntBASIC3.57□□□□□ -1.84
SRP9P49458 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.57□□□□□ -1.84
SRP9P49458 AL136097.1-201ENST00000456945 913 ntBASIC3.57□□□□□ -1.84
SRP9P49458 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.57□□□□□ -1.84
SRP9P49458 RPL7L1P8-201ENST00000469911 741 ntBASIC3.57□□□□□ -1.84
SRP9P49458 AC041039.1-201ENST00000485656 536 ntBASIC3.57□□□□□ -1.84
SRP9P49458 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.57□□□□□ -1.84
SRP9P49458 RPL7P47-201ENST00000497299 556 ntBASIC3.57□□□□□ -1.84
SRP9P49458 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
SRP9P49458 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.57□□□□□ -1.84
SRP9P49458 AC099522.1-202ENST00000514718 367 ntBASIC3.57□□□□□ -1.84
SRP9P49458 AP003730.1-201ENST00000524605 285 ntBASIC3.57□□□□□ -1.84
SRP9P49458 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.57□□□□□ -1.84
SRP9P49458 GNRHR2P1-201ENST00000555315 631 ntBASIC3.57□□□□□ -1.84
SRP9P49458 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.57□□□□□ -1.84
SRP9P49458 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SRP9P49458 MIR3138-201ENST00000585238 82 ntBASIC3.57□□□□□ -1.84
SRP9P49458 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.57□□□□□ -1.84
SRP9P49458 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.57□□□□□ -1.84
SRP9P49458 AL161729.3-201ENST00000603533 673 ntBASIC3.57□□□□□ -1.84
SRP9P49458 AL049844.2-201ENST00000604280 628 ntBASIC3.57□□□□□ -1.84
SRP9P49458 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.57□□□□□ -1.84
SRP9P49458 AC005962.2-201ENST00000611427 652 ntBASIC3.57□□□□□ -1.84
SRP9P49458 MIR378J-201ENST00000611988 109 ntBASIC3.57□□□□□ -1.84
SRP9P49458 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.57□□□□□ -1.84
SRP9P49458 MIR6830-201ENST00000636015 70 ntBASIC3.57□□□□□ -1.84
SRP9P49458 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SRP9P49458 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SRP9P49458 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SRP9P49458 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SRP9P49458 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SRP9P49458 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SRP9P49458 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SRP9P49458 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SRP9P49458 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.56□□□□□ -1.84
SRP9P49458 CCT8P1-201ENST00000413611 1657 ntBASIC3.56□□□□□ -1.84
SRP9P49458 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
SRP9P49458 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.56□□□□□ -1.84
SRP9P49458 LARP1BP1-201ENST00000506036 1359 ntBASIC3.56□□□□□ -1.84
SRP9P49458 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.56□□□□□ -1.84
SRP9P49458 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SRP9P49458 Z98941.1-201ENST00000407764 100 ntBASIC3.56□□□□□ -1.84
SRP9P49458 PGBD4P8-201ENST00000412993 562 ntBASIC3.56□□□□□ -1.84
SRP9P49458 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.56□□□□□ -1.84
SRP9P49458 CEACAMP4-201ENST00000457676 421 ntBASIC3.56□□□□□ -1.84
SRP9P49458 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.56□□□□□ -1.84
SRP9P49458 RN7SL93P-201ENST00000463035 293 ntBASIC3.56□□□□□ -1.84
SRP9P49458 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SRP9P49458 AC010618.1-201ENST00000469924 477 ntBASIC3.56□□□□□ -1.84
SRP9P49458 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.56□□□□□ -1.84
SRP9P49458 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.56□□□□□ -1.84
SRP9P49458 AC026979.1-201ENST00000492525 396 ntBASIC3.56□□□□□ -1.84
SRP9P49458 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC3.56□□□□□ -1.84
SRP9P49458 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.56□□□□□ -1.84
SRP9P49458 SNORA31.9-201ENST00000516429 84 ntBASIC3.56□□□□□ -1.84
SRP9P49458 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.56□□□□□ -1.84
SRP9P49458 IGKV2-23-201ENST00000518729 323 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms