Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RPS26P40-201ENST00000435209 294 ntBASIC4.52□□□□□ -1.69
SOX2P48431 ACTR3P2-201ENST00000439585 1257 ntBASIC4.52□□□□□ -1.69
SOX2P48431 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.52□□□□□ -1.69
SOX2P48431 TAF9P1-201ENST00000445421 515 ntBASIC4.52□□□□□ -1.69
SOX2P48431 MTND2P19-201ENST00000449129 1012 ntBASIC4.52□□□□□ -1.69
SOX2P48431 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.52□□□□□ -1.69
SOX2P48431 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.52□□□□□ -1.69
SOX2P48431 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.52□□□□□ -1.69
SOX2P48431 TAF9P2-201ENST00000454958 515 ntBASIC4.52□□□□□ -1.69
SOX2P48431 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.52□□□□□ -1.69
SOX2P48431 RNU6-1218P-201ENST00000458990 108 ntBASIC4.52□□□□□ -1.69
SOX2P48431 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
SOX2P48431 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.52□□□□□ -1.69
SOX2P48431 RPL37P23-201ENST00000492641 294 ntBASIC4.52□□□□□ -1.69
SOX2P48431 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.52□□□□□ -1.69
SOX2P48431 MTATP6P22-201ENST00000507369 598 ntBASIC4.52□□□□□ -1.69
SOX2P48431 MTND4P2-201ENST00000507767 1203 ntBASIC4.52□□□□□ -1.69
SOX2P48431 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.52□□□□□ -1.69
SOX2P48431 MTND3P5-201ENST00000512798 333 ntBASIC4.52□□□□□ -1.69
SOX2P48431 RNA5SP473-201ENST00000516402 125 ntBASIC4.52□□□□□ -1.69
SOX2P48431 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.52□□□□□ -1.69
SOX2P48431 NDUFA5P2-201ENST00000519723 344 ntBASIC4.52□□□□□ -1.69
SOX2P48431 AF279873.1-201ENST00000523393 313 ntBASIC4.52□□□□□ -1.69
SOX2P48431 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.52□□□□□ -1.69
SOX2P48431 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.52□□□□□ -1.69
SOX2P48431 BLZF2P-201ENST00000553776 1130 ntBASIC4.52□□□□□ -1.69
SOX2P48431 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.52□□□□□ -1.69
SOX2P48431 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.52□□□□□ -1.69
SOX2P48431 AC093519.1-201ENST00000566109 298 ntBASIC4.52□□□□□ -1.69
SOX2P48431 AC138915.2-201ENST00000569776 97 ntBASIC4.52□□□□□ -1.69
SOX2P48431 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.52□□□□□ -1.69
SOX2P48431 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.52□□□□□ -1.69
SOX2P48431 WISP1-OT1-201ENST00000602893 642 ntBASIC4.52□□□□□ -1.69
SOX2P48431 AC018695.5-201ENST00000605872 315 ntBASIC4.52□□□□□ -1.69
SOX2P48431 AC091946.2-201ENST00000606105 291 ntBASIC4.52□□□□□ -1.69
SOX2P48431 AC023813.4-201ENST00000607580 580 ntBASIC4.52□□□□□ -1.69
SOX2P48431 AC245297.2-201ENST00000610119 565 ntBASIC4.52□□□□□ -1.69
SOX2P48431 MIR7109-201ENST00000613748 65 ntBASIC4.52□□□□□ -1.69
SOX2P48431 AL133243.1-201ENST00000614487 366 ntBASIC4.52□□□□□ -1.69
SOX2P48431 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.52□□□□□ -1.69
SOX2P48431 AC026585.1-201ENST00000619582 524 ntBASIC4.52□□□□□ -1.69
SOX2P48431 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SOX2P48431 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SOX2P48431 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.52□□□□□ -1.69
SOX2P48431 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SOX2P48431 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SOX2P48431 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.52□□□□□ -1.69
SOX2P48431 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SOX2P48431 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SOX2P48431 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SOX2P48431 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SOX2P48431 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SOX2P48431 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.52□□□□□ -1.69
SOX2P48431 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SOX2P48431 CDR1-202ENST00000625883 1485 ntBASIC4.51□□□□□ -1.69
SOX2P48431 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SOX2P48431 AC092162.3-201ENST00000624511 1624 ntBASIC4.51□□□□□ -1.69
SOX2P48431 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.51□□□□□ -1.69
SOX2P48431 RNA5SP319-201ENST00000362768 119 ntBASIC4.51□□□□□ -1.69
SOX2P48431 RNU1-74P-201ENST00000384108 171 ntBASIC4.51□□□□□ -1.69
SOX2P48431 AL078599.1-201ENST00000402075 293 ntBASIC4.51□□□□□ -1.69
SOX2P48431 GSTM3P2-201ENST00000412746 530 ntBASIC4.51□□□□□ -1.69
SOX2P48431 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.51□□□□□ -1.69
SOX2P48431 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.51□□□□□ -1.69
SOX2P48431 OR2AH1P-201ENST00000425717 928 ntBASIC4.51□□□□□ -1.69
SOX2P48431 MED14P1-201ENST00000430517 648 ntBASIC4.51□□□□□ -1.69
SOX2P48431 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.51□□□□□ -1.69
SOX2P48431 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.51□□□□□ -1.69
SOX2P48431 RPL35AP21-201ENST00000437667 333 ntBASIC4.51□□□□□ -1.69
SOX2P48431 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.51□□□□□ -1.69
SOX2P48431 NPM1P33-201ENST00000438918 872 ntBASIC4.51□□□□□ -1.69
SOX2P48431 FHP1-201ENST00000442741 703 ntBASIC4.51□□□□□ -1.69
SOX2P48431 AC073909.1-201ENST00000447112 999 ntBASIC4.51□□□□□ -1.69
SOX2P48431 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.51□□□□□ -1.69
SOX2P48431 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.51□□□□□ -1.69
SOX2P48431 RPL23AP35-201ENST00000451906 501 ntBASIC4.51□□□□□ -1.69
SOX2P48431 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.51□□□□□ -1.69
SOX2P48431 AC090638.1-201ENST00000498296 909 ntBASIC4.51□□□□□ -1.69
SOX2P48431 ARL4AP1-201ENST00000503220 705 ntBASIC4.51□□□□□ -1.69
SOX2P48431 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SOX2P48431 snoU109.6-201ENST00000516831 118 ntBASIC4.51□□□□□ -1.69
SOX2P48431 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.51□□□□□ -1.69
SOX2P48431 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.51□□□□□ -1.69
SOX2P48431 HMGB1P40-201ENST00000525121 540 ntBASIC4.51□□□□□ -1.69
SOX2P48431 BNIP3P1-201ENST00000547295 580 ntBASIC4.51□□□□□ -1.69
SOX2P48431 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.51□□□□□ -1.69
SOX2P48431 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.51□□□□□ -1.69
SOX2P48431 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SOX2P48431 AC127381.1-201ENST00000555979 939 ntBASIC4.51□□□□□ -1.69
SOX2P48431 SULT1C2P2-201ENST00000562517 294 ntBASIC4.51□□□□□ -1.69
SOX2P48431 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.51□□□□□ -1.69
SOX2P48431 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.51□□□□□ -1.69
SOX2P48431 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.51□□□□□ -1.69
SOX2P48431 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.51□□□□□ -1.69
SOX2P48431 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.51□□□□□ -1.69
SOX2P48431 AL354760.1-201ENST00000608357 643 ntBASIC4.51□□□□□ -1.69
SOX2P48431 MIR6071-201ENST00000616741 78 ntBASIC4.51□□□□□ -1.69
SOX2P48431 AC243756.2-201ENST00000618406 463 ntBASIC4.51□□□□□ -1.69
SOX2P48431 CU639417.4-201ENST00000623928 207 ntBASIC4.51□□□□□ -1.69
SOX2P48431 PCMTD1P7-201ENST00000634506 357 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms