Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.97□□□□□ -1.77
HTTP42858 AC090286.3-201ENST00000573133 187 ntBASIC3.97□□□□□ -1.77
HTTP42858 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.97□□□□□ -1.77
HTTP42858 AC127502.3-201ENST00000636170 1206 ntBASIC3.97□□□□□ -1.77
HTTP42858 AL034408.1-201ENST00000637712 664 ntBASIC3.97□□□□□ -1.77
HTTP42858 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
HTTP42858 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HTTP42858 AF117829.1-206ENST00000621883 3802 ntBASIC3.97□□□□□ -1.77
HTTP42858 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.97□□□□□ -1.77
HTTP42858 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
HTTP42858 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.97□□□□□ -1.77
HTTP42858 AC104623.2-202ENST00000623477 4002 ntBASIC3.97□□□□□ -1.77
HTTP42858 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HTTP42858 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HTTP42858 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HTTP42858 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HTTP42858 FRG1CP-201ENST00000358464 769 ntBASIC3.97□□□□□ -1.77
HTTP42858 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.97□□□□□ -1.77
HTTP42858 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.97□□□□□ -1.77
HTTP42858 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC3.97□□□□□ -1.77
HTTP42858 AL121839.2-201ENST00000565058 6943 ntBASIC3.97□□□□□ -1.77
HTTP42858 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
HTTP42858 AL021877.2-201ENST00000624442 10684 ntBASIC3.97□□□□□ -1.77
HTTP42858 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HTTP42858 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.97□□□□□ -1.77
HTTP42858 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HTTP42858 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC3.97□□□□□ -1.77
HTTP42858 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC3.97□□□□□ -1.77
HTTP42858 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.97□□□□□ -1.77
HTTP42858 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HTTP42858 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC3.97□□□□□ -1.77
HTTP42858 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.97□□□□□ -1.77
HTTP42858 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.97□□□□□ -1.77
HTTP42858 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.97□□□□□ -1.77
HTTP42858 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC3.97□□□□□ -1.77
HTTP42858 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC3.97□□□□□ -1.77
HTTP42858 BTBD10P1-201ENST00000549824 1352 ntBASIC3.96□□□□□ -1.77
HTTP42858 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.77
HTTP42858 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
HTTP42858 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.77
HTTP42858 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.96□□□□□ -1.78
HTTP42858 AL645937.1-201ENST00000641739 1652 ntBASIC3.96□□□□□ -1.78
HTTP42858 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.96□□□□□ -1.78
HTTP42858 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
HTTP42858 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
HTTP42858 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.96□□□□□ -1.78
HTTP42858 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.96□□□□□ -1.78
HTTP42858 IGKV2-26-201ENST00000518305 343 ntBASIC3.96□□□□□ -1.78
HTTP42858 AC023161.2-201ENST00000551218 780 ntBASIC3.96□□□□□ -1.78
HTTP42858 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.96□□□□□ -1.78
HTTP42858 AC004014.2-201ENST00000623718 5122 ntBASIC3.96□□□□□ -1.78
HTTP42858 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HTTP42858 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HTTP42858 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HTTP42858 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HTTP42858 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC3.96□□□□□ -1.78
HTTP42858 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.96□□□□□ -1.78
HTTP42858 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HTTP42858 Z99755.1-201ENST00000414048 380 ntBASIC3.96□□□□□ -1.78
HTTP42858 OR51A6P-201ENST00000418680 1004 ntBASIC3.96□□□□□ -1.78
HTTP42858 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.96□□□□□ -1.78
HTTP42858 OR6K4P-201ENST00000423179 955 ntBASIC3.96□□□□□ -1.78
HTTP42858 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3.96□□□□□ -1.78
HTTP42858 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC3.96□□□□□ -1.78
HTTP42858 RFPL4AP5-201ENST00000514977 504 ntBASIC3.96□□□□□ -1.78
HTTP42858 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.96□□□□□ -1.78
HTTP42858 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC3.96□□□□□ -1.78
HTTP42858 MIR4769-201ENST00000584126 77 ntBASIC3.96□□□□□ -1.78
HTTP42858 Xist_exon4.1-201ENST00000615964 126 ntBASIC3.96□□□□□ -1.78
HTTP42858 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.96□□□□□ -1.78
HTTP42858 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HTTP42858 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HTTP42858 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
HTTP42858 RNU4-82P-201ENST00000362443 140 ntBASIC3.95□□□□□ -1.78
HTTP42858 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HTTP42858 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HTTP42858 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.95□□□□□ -1.78
HTTP42858 RPL7P38-201ENST00000488396 739 ntBASIC3.95□□□□□ -1.78
HTTP42858 AC092868.3-201ENST00000560515 784 ntBASIC3.95□□□□□ -1.78
HTTP42858 AC073657.2-201ENST00000605661 303 ntBASIC3.95□□□□□ -1.78
HTTP42858 AC097505.1-201ENST00000610199 565 ntBASIC3.95□□□□□ -1.78
HTTP42858 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.95□□□□□ -1.78
HTTP42858 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HTTP42858 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC3.95□□□□□ -1.78
HTTP42858 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HTTP42858 OR1AA1P-201ENST00000419597 916 ntBASIC3.95□□□□□ -1.78
HTTP42858 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.95□□□□□ -1.78
HTTP42858 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.95□□□□□ -1.78
HTTP42858 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.95□□□□□ -1.78
HTTP42858 AC093755.1-201ENST00000512950 1023 ntBASIC3.95□□□□□ -1.78
HTTP42858 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HTTP42858 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.95□□□□□ -1.78
HTTP42858 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.95□□□□□ -1.78
HTTP42858 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC3.95□□□□□ -1.78
HTTP42858 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.95□□□□□ -1.78
HTTP42858 AP003355.3-201ENST00000623465 114 ntBASIC3.95□□□□□ -1.78
HTTP42858 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HTTP42858 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HTTP42858 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HTTP42858 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms