Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.59□□□□□ -1.52
COL15A1P39059 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
COL15A1P39059 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.52
COL15A1P39059 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.59□□□□□ -1.52
COL15A1P39059 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
COL15A1P39059 SPATA2P1-201ENST00000431223 2055 ntBASIC5.58□□□□□ -1.52
COL15A1P39059 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.58□□□□□ -1.52
COL15A1P39059 AL603865.2-201ENST00000401679 213 ntBASIC5.58□□□□□ -1.52
COL15A1P39059 AL359643.1-201ENST00000404109 423 ntBASIC5.58□□□□□ -1.52
COL15A1P39059 SNORA11.2-201ENST00000408318 127 ntBASIC5.58□□□□□ -1.52
COL15A1P39059 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.58□□□□□ -1.52
COL15A1P39059 MFSD13B-201ENST00000420133 1290 ntBASIC5.58□□□□□ -1.52
COL15A1P39059 NANOGP5-201ENST00000424456 877 ntBASIC5.58□□□□□ -1.52
COL15A1P39059 MTND2P5-201ENST00000432656 1006 ntBASIC5.58□□□□□ -1.52
COL15A1P39059 AL035458.1-201ENST00000433096 585 ntBASIC5.58□□□□□ -1.52
COL15A1P39059 AC107015.1-201ENST00000466902 747 ntBASIC5.58□□□□□ -1.52
COL15A1P39059 RPS4XP6-201ENST00000477670 797 ntBASIC5.58□□□□□ -1.52
COL15A1P39059 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.58□□□□□ -1.52
COL15A1P39059 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.58□□□□□ -1.52
COL15A1P39059 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.58□□□□□ -1.52
COL15A1P39059 AC020699.1-201ENST00000505161 445 ntBASIC5.58□□□□□ -1.52
COL15A1P39059 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.58□□□□□ -1.52
COL15A1P39059 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.58□□□□□ -1.52
COL15A1P39059 SNORA31.13-201ENST00000516624 135 ntBASIC5.58□□□□□ -1.52
COL15A1P39059 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.58□□□□□ -1.52
COL15A1P39059 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.58□□□□□ -1.52
COL15A1P39059 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.58□□□□□ -1.52
COL15A1P39059 MTND3P12-201ENST00000559068 328 ntBASIC5.58□□□□□ -1.52
COL15A1P39059 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.58□□□□□ -1.52
COL15A1P39059 AC012254.4-201ENST00000588843 273 ntBASIC5.58□□□□□ -1.52
COL15A1P39059 AC234772.3-201ENST00000602277 528 ntBASIC5.58□□□□□ -1.52
COL15A1P39059 AL161729.3-201ENST00000603533 673 ntBASIC5.58□□□□□ -1.52
COL15A1P39059 AL354984.3-201ENST00000604803 325 ntBASIC5.58□□□□□ -1.52
COL15A1P39059 AC006133.1-201ENST00000617106 264 ntBASIC5.58□□□□□ -1.52
COL15A1P39059 AC074140.1-201ENST00000621617 208 ntBASIC5.58□□□□□ -1.52
COL15A1P39059 PCAT14-202ENST00000627127 3935 ntBASIC5.58□□□□□ -1.52
COL15A1P39059 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.58□□□□□ -1.52
COL15A1P39059 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL15A1P39059 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
COL15A1P39059 CYP1D1P-201ENST00000416662 1433 ntBASIC5.58□□□□□ -1.52
COL15A1P39059 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL15A1P39059 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
COL15A1P39059 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
COL15A1P39059 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL15A1P39059 RN7SKP33-201ENST00000410942 340 ntBASIC5.57□□□□□ -1.52
COL15A1P39059 AL117339.2-201ENST00000430475 180 ntBASIC5.57□□□□□ -1.52
COL15A1P39059 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.57□□□□□ -1.52
COL15A1P39059 RPL21P89-201ENST00000444021 467 ntBASIC5.57□□□□□ -1.52
COL15A1P39059 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.57□□□□□ -1.52
COL15A1P39059 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL15A1P39059 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL15A1P39059 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.57□□□□□ -1.52
COL15A1P39059 RPS20P4-201ENST00000461659 355 ntBASIC5.57□□□□□ -1.52
COL15A1P39059 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.57□□□□□ -1.52
COL15A1P39059 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL15A1P39059 AC025459.1-201ENST00000504072 156 ntBASIC5.57□□□□□ -1.52
COL15A1P39059 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.57□□□□□ -1.52
COL15A1P39059 AC108064.1-201ENST00000513791 460 ntBASIC5.57□□□□□ -1.52
COL15A1P39059 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL15A1P39059 RNA5SP49-201ENST00000516450 115 ntBASIC5.57□□□□□ -1.52
COL15A1P39059 RNU6-1308P-201ENST00000516817 103 ntBASIC5.57□□□□□ -1.52
COL15A1P39059 MTND2P38-201ENST00000522536 667 ntBASIC5.57□□□□□ -1.52
COL15A1P39059 MTCO1P49-201ENST00000523429 802 ntBASIC5.57□□□□□ -1.52
COL15A1P39059 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.57□□□□□ -1.52
COL15A1P39059 AC109635.6-201ENST00000525487 1113 ntBASIC5.57□□□□□ -1.52
COL15A1P39059 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.57□□□□□ -1.52
COL15A1P39059 LRRC34P1-201ENST00000542742 915 ntBASIC5.57□□□□□ -1.52
COL15A1P39059 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.57□□□□□ -1.52
COL15A1P39059 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.57□□□□□ -1.52
COL15A1P39059 ZNF971P-201ENST00000562068 1249 ntBASIC5.57□□□□□ -1.52
COL15A1P39059 AGGF1P6-201ENST00000569213 976 ntBASIC5.57□□□□□ -1.52
COL15A1P39059 RN7SL703P-201ENST00000578485 302 ntBASIC5.57□□□□□ -1.52
COL15A1P39059 AL160237.3-201ENST00000604114 1013 ntBASIC5.57□□□□□ -1.52
COL15A1P39059 AL450336.1-201ENST00000605180 586 ntBASIC5.57□□□□□ -1.52
COL15A1P39059 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
COL15A1P39059 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL15A1P39059 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL15A1P39059 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL15A1P39059 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
COL15A1P39059 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL15A1P39059 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL15A1P39059 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL15A1P39059 AL603750.1-201ENST00000624216 1717 ntBASIC5.57□□□□□ -1.52
COL15A1P39059 MIR142-201ENST00000384835 87 ntBASIC5.56□□□□□ -1.52
COL15A1P39059 PEX12P1-201ENST00000400284 1048 ntBASIC5.56□□□□□ -1.52
COL15A1P39059 MIR1271-201ENST00000408537 86 ntBASIC5.56□□□□□ -1.52
COL15A1P39059 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.56□□□□□ -1.52
COL15A1P39059 AL592310.1-201ENST00000414330 671 ntBASIC5.56□□□□□ -1.52
COL15A1P39059 LIPT1P1-201ENST00000415870 1186 ntBASIC5.56□□□□□ -1.52
COL15A1P39059 HIGD1AP15-201ENST00000416198 280 ntBASIC5.56□□□□□ -1.52
COL15A1P39059 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.56□□□□□ -1.52
COL15A1P39059 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
COL15A1P39059 HSPE1P16-201ENST00000426640 348 ntBASIC5.56□□□□□ -1.52
COL15A1P39059 CETN4P-201ENST00000432407 469 ntBASIC5.56□□□□□ -1.52
COL15A1P39059 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.56□□□□□ -1.52
COL15A1P39059 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.56□□□□□ -1.52
COL15A1P39059 AL358794.1-201ENST00000445689 381 ntBASIC5.56□□□□□ -1.52
COL15A1P39059 AC112206.1-201ENST00000468416 477 ntBASIC5.56□□□□□ -1.52
COL15A1P39059 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
COL15A1P39059 RPL23AP37-201ENST00000479658 549 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms