Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.18□□□□□ -1.74
HMGCLP35914 LARP1BP1-201ENST00000506036 1359 ntBASIC4.18□□□□□ -1.74
HMGCLP35914 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HMGCLP35914 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HMGCLP35914 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HMGCLP35914 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HMGCLP35914 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HMGCLP35914 RNU6-603P-201ENST00000411403 107 ntBASIC4.18□□□□□ -1.74
HMGCLP35914 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.18□□□□□ -1.74
HMGCLP35914 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGCLP35914 AC007000.2-201ENST00000442564 487 ntBASIC4.18□□□□□ -1.74
HMGCLP35914 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.18□□□□□ -1.74
HMGCLP35914 RPS23P7-201ENST00000466210 444 ntBASIC4.18□□□□□ -1.74
HMGCLP35914 NDUFA5P9-201ENST00000472609 340 ntBASIC4.18□□□□□ -1.74
HMGCLP35914 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.18□□□□□ -1.74
HMGCLP35914 RPS27AP13-201ENST00000498403 237 ntBASIC4.18□□□□□ -1.74
HMGCLP35914 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.18□□□□□ -1.74
HMGCLP35914 HPRT1P1-201ENST00000509498 657 ntBASIC4.18□□□□□ -1.74
HMGCLP35914 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.18□□□□□ -1.74
HMGCLP35914 AC027338.1-201ENST00000514840 825 ntBASIC4.18□□□□□ -1.74
HMGCLP35914 SNORA26.10-201ENST00000516427 141 ntBASIC4.18□□□□□ -1.74
HMGCLP35914 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.18□□□□□ -1.74
HMGCLP35914 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.18□□□□□ -1.74
HMGCLP35914 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.18□□□□□ -1.74
HMGCLP35914 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGCLP35914 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.18□□□□□ -1.74
HMGCLP35914 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGCLP35914 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.18□□□□□ -1.74
HMGCLP35914 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.18□□□□□ -1.74
HMGCLP35914 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.18□□□□□ -1.74
HMGCLP35914 KPNA2P3-201ENST00000584190 848 ntBASIC4.18□□□□□ -1.74
HMGCLP35914 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGCLP35914 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.18□□□□□ -1.74
HMGCLP35914 AC006116.5-201ENST00000591936 559 ntBASIC4.18□□□□□ -1.74
HMGCLP35914 AL139286.1-201ENST00000604465 483 ntBASIC4.18□□□□□ -1.74
HMGCLP35914 AC005014.3-201ENST00000605985 190 ntBASIC4.18□□□□□ -1.74
HMGCLP35914 AC034236.3-201ENST00000605999 461 ntBASIC4.18□□□□□ -1.74
HMGCLP35914 AL136370.1-201ENST00000608166 691 ntBASIC4.18□□□□□ -1.74
HMGCLP35914 AC019131.2-201ENST00000609071 870 ntBASIC4.18□□□□□ -1.74
HMGCLP35914 AC064801.1-201ENST00000612025 407 ntBASIC4.18□□□□□ -1.74
HMGCLP35914 AC078899.5-201ENST00000612475 178 ntBASIC4.18□□□□□ -1.74
HMGCLP35914 AP006248.3-201ENST00000623580 594 ntBASIC4.18□□□□□ -1.74
HMGCLP35914 OR52H1-202ENST00000641796 1061 ntBASIC4.18□□□□□ -1.74
HMGCLP35914 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HMGCLP35914 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
HMGCLP35914 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGCLP35914 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HMGCLP35914 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.17□□□□□ -1.74
HMGCLP35914 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
HMGCLP35914 AC005261.4-201ENST00000600047 1385 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 AC011266.1-201ENST00000624119 3569 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HMGCLP35914 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.17□□□□□ -1.74
HMGCLP35914 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
HMGCLP35914 FAM3C2-201ENST00000312214 681 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HMGCLP35914 RN7SKP44-201ENST00000363602 316 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGCLP35914 AL353692.2-201ENST00000407054 335 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.17□□□□□ -1.74
HMGCLP35914 MTCYBP7-201ENST00000419540 1134 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGCLP35914 RPL23AP38-201ENST00000423801 469 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 COX6CP15-201ENST00000426313 211 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 EIF2S2P3-201ENST00000428356 999 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 AC012497.1-201ENST00000429392 575 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HMGCLP35914 HLA-N-201ENST00000437516 135 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.17□□□□□ -1.74
HMGCLP35914 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.17□□□□□ -1.74
HMGCLP35914 NUTF2P3-201ENST00000448540 384 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 AL451050.1-201ENST00000450126 415 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGCLP35914 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGCLP35914 AC010618.1-201ENST00000469924 477 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 AC037198.2-201ENST00000478845 733 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 AC026979.1-201ENST00000492525 396 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 SUMO1P1-201ENST00000497904 306 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 AC021087.2-201ENST00000504656 1203 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.17□□□□□ -1.74
HMGCLP35914 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.17□□□□□ -1.74
HMGCLP35914 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGCLP35914 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGCLP35914 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGCLP35914 AC023575.1-201ENST00000580510 358 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGCLP35914 MIR6716-201ENST00000613413 80 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 AC008785.1-201ENST00000624475 456 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 AP005264.7-201ENST00000625003 745 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.17□□□□□ -1.74
HMGCLP35914 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.17□□□□□ -1.74
HMGCLP35914 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.17□□□□□ -1.74
HMGCLP35914 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HMGCLP35914 AC007342.7-201ENST00000624610 2337 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
HMGCLP35914 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.17□□□□□ -1.74
HMGCLP35914 AC009313.2-201ENST00000417893 1941 ntBASIC4.17□□□□□ -1.74
HMGCLP35914 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms