Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 VN1R48P-201ENST00000448149 1036 ntBASIC3.54□□□□□ -1.84
HLA-DMAP28067 DHFRP3-201ENST00000455595 559 ntBASIC3.54□□□□□ -1.84
HLA-DMAP28067 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 CEACAMP4-201ENST00000457676 421 ntBASIC3.54□□□□□ -1.84
HLA-DMAP28067 RNU7-170P-201ENST00000459303 61 ntBASIC3.54□□□□□ -1.84
HLA-DMAP28067 RPL9P32-201ENST00000464118 620 ntBASIC3.54□□□□□ -1.84
HLA-DMAP28067 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 AC117394.1-201ENST00000477323 567 ntBASIC3.54□□□□□ -1.84
HLA-DMAP28067 RPS29P19-201ENST00000479709 171 ntBASIC3.54□□□□□ -1.84
HLA-DMAP28067 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 RNA5SP34-201ENST00000516887 130 ntBASIC3.54□□□□□ -1.84
HLA-DMAP28067 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 AC025857.1-201ENST00000525252 377 ntBASIC3.54□□□□□ -1.84
HLA-DMAP28067 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 AL121576.1-201ENST00000556055 276 ntBASIC3.54□□□□□ -1.84
HLA-DMAP28067 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 AC091042.1-201ENST00000579213 173 ntBASIC3.54□□□□□ -1.84
HLA-DMAP28067 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 RNA5SP108-201ENST00000605921 117 ntBASIC3.54□□□□□ -1.84
HLA-DMAP28067 AC025175.1-201ENST00000606482 759 ntBASIC3.54□□□□□ -1.84
HLA-DMAP28067 AC006946.3-201ENST00000609791 756 ntBASIC3.54□□□□□ -1.84
HLA-DMAP28067 AC022467.1-201ENST00000614738 749 ntBASIC3.54□□□□□ -1.84
HLA-DMAP28067 AC138649.5-201ENST00000637456 137 ntBASIC3.54□□□□□ -1.84
HLA-DMAP28067 AC008013.2-202ENST00000637965 364 ntBASIC3.54□□□□□ -1.84
HLA-DMAP28067 MIR4302-201ENST00000638058 60 ntBASIC3.54□□□□□ -1.84
HLA-DMAP28067 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DMAP28067 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DMAP28067 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
HLA-DMAP28067 OTUD4P1-201ENST00000237841 3067 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DMAP28067 RNA5SP507-201ENST00000363603 121 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DMAP28067 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
HLA-DMAP28067 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.53□□□□□ -1.84
HLA-DMAP28067 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
HLA-DMAP28067 MIR298-201ENST00000401212 88 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 PGBD4P8-201ENST00000412993 562 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DMAP28067 AC079355.1-201ENST00000421770 223 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 RPL7AP25-201ENST00000423357 805 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DMAP28067 RPS24P8-201ENST00000431490 402 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DMAP28067 MTCYBP21-201ENST00000443300 1113 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 ARL2BPP10-201ENST00000446487 531 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DMAP28067 HMGB3P8-201ENST00000449709 577 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.53□□□□□ -1.84
HLA-DMAP28067 TPMTP4-201ENST00000450749 678 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 AC091685.2-201ENST00000454924 864 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DMAP28067 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.53□□□□□ -1.84
HLA-DMAP28067 AC018638.3-201ENST00000461273 132 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DMAP28067 TMED11P-201ENST00000479478 690 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 AC011005.3-201ENST00000491624 395 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 TRAV31-201ENST00000502780 342 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 ACTR6P1-201ENST00000514311 1104 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC3.53□□□□□ -1.84
HLA-DMAP28067 MTCO1P30-201ENST00000515244 580 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 AC008802.1-201ENST00000519121 791 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 AP000827.1-201ENST00000527814 258 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.53□□□□□ -1.84
HLA-DMAP28067 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DMAP28067 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
HLA-DMAP28067 CYP2C60P-201ENST00000566088 139 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.53□□□□□ -1.84
HLA-DMAP28067 AC006270.2-201ENST00000578523 652 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 MIR4310-201ENST00000582950 57 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 AC022146.1-201ENST00000595307 847 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DMAP28067 RMST_8.1-201ENST00000610287 165 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 AL590410.1-201ENST00000617925 333 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DMAP28067 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DMAP28067 RIOK3P1-201ENST00000418778 1528 ntBASIC3.53□□□□□ -1.84
HLA-DMAP28067 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
HLA-DMAP28067 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
HLA-DMAP28067 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
HLA-DMAP28067 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DMAP28067 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
HLA-DMAP28067 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HLA-DMAP28067 CEP170P1-201ENST00000502249 4587 ntBASIC3.52□□□□□ -1.85
HLA-DMAP28067 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DMAP28067 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DMAP28067 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms