Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.35□□□□□ -1.87
COL8A2P25067 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.35□□□□□ -1.87
COL8A2P25067 AC015726.1-201ENST00000602353 681 ntBASIC3.35□□□□□ -1.87
COL8A2P25067 AC090912.3-201ENST00000609775 533 ntBASIC3.35□□□□□ -1.87
COL8A2P25067 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.35□□□□□ -1.87
COL8A2P25067 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL8A2P25067 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
COL8A2P25067 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL8A2P25067 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL8A2P25067 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL8A2P25067 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL8A2P25067 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
COL8A2P25067 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL8A2P25067 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.35□□□□□ -1.87
COL8A2P25067 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.35□□□□□ -1.87
COL8A2P25067 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL8A2P25067 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL8A2P25067 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL8A2P25067 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL8A2P25067 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
COL8A2P25067 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.34□□□□□ -1.87
COL8A2P25067 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
COL8A2P25067 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
COL8A2P25067 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
COL8A2P25067 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
COL8A2P25067 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
COL8A2P25067 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
COL8A2P25067 RNA5SP399-201ENST00000364003 117 ntBASIC3.34□□□□□ -1.87
COL8A2P25067 RNU6-729P-201ENST00000384399 107 ntBASIC3.34□□□□□ -1.87
COL8A2P25067 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
COL8A2P25067 OR51A6P-201ENST00000418680 1004 ntBASIC3.34□□□□□ -1.87
COL8A2P25067 MTCO1P51-201ENST00000427672 1060 ntBASIC3.34□□□□□ -1.87
COL8A2P25067 Z95327.1-201ENST00000446082 482 ntBASIC3.34□□□□□ -1.87
COL8A2P25067 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.34□□□□□ -1.87
COL8A2P25067 APOOP2-201ENST00000461561 539 ntBASIC3.34□□□□□ -1.87
COL8A2P25067 AC007537.2-201ENST00000472093 511 ntBASIC3.34□□□□□ -1.87
COL8A2P25067 AC006517.1-201ENST00000480485 328 ntBASIC3.34□□□□□ -1.87
COL8A2P25067 RN7SL323P-201ENST00000494712 295 ntBASIC3.34□□□□□ -1.87
COL8A2P25067 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.34□□□□□ -1.87
COL8A2P25067 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.34□□□□□ -1.87
COL8A2P25067 RN7SKP141-201ENST00000516167 338 ntBASIC3.34□□□□□ -1.87
COL8A2P25067 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.34□□□□□ -1.87
COL8A2P25067 OR5M7P-201ENST00000526140 972 ntBASIC3.34□□□□□ -1.87
COL8A2P25067 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
COL8A2P25067 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.34□□□□□ -1.87
COL8A2P25067 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.34□□□□□ -1.87
COL8A2P25067 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.34□□□□□ -1.87
COL8A2P25067 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.34□□□□□ -1.87
COL8A2P25067 AC007599.1-201ENST00000568688 1174 ntBASIC3.34□□□□□ -1.87
COL8A2P25067 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.34□□□□□ -1.87
COL8A2P25067 AL451086.1-201ENST00000605596 223 ntBASIC3.34□□□□□ -1.87
COL8A2P25067 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.34□□□□□ -1.87
COL8A2P25067 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.34□□□□□ -1.87
COL8A2P25067 FP236240.3-201ENST00000623061 327 ntBASIC3.34□□□□□ -1.87
COL8A2P25067 AC034229.5-201ENST00000624258 185 ntBASIC3.34□□□□□ -1.87
COL8A2P25067 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.34□□□□□ -1.87
COL8A2P25067 AC233968.1-201ENST00000611212 1300 ntBASIC3.34□□□□□ -1.87
COL8A2P25067 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
COL8A2P25067 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.34□□□□□ -1.88
COL8A2P25067 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
COL8A2P25067 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
COL8A2P25067 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
COL8A2P25067 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
COL8A2P25067 AC006042.3-201ENST00000454684 1469 ntBASIC3.34□□□□□ -1.88
COL8A2P25067 AP002001.2-201ENST00000529025 1469 ntBASIC3.34□□□□□ -1.88
COL8A2P25067 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
COL8A2P25067 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
COL8A2P25067 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
COL8A2P25067 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.33□□□□□ -1.88
COL8A2P25067 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL8A2P25067 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
COL8A2P25067 RNU6-178P-201ENST00000384631 104 ntBASIC3.33□□□□□ -1.88
COL8A2P25067 ATP5F1P3-201ENST00000397213 657 ntBASIC3.33□□□□□ -1.88
COL8A2P25067 AL590704.1-201ENST00000402856 794 ntBASIC3.33□□□□□ -1.88
COL8A2P25067 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL8A2P25067 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.33□□□□□ -1.88
COL8A2P25067 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL8A2P25067 AC004552.1-201ENST00000419089 348 ntBASIC3.33□□□□□ -1.88
COL8A2P25067 Z97055.1-201ENST00000419730 712 ntBASIC3.33□□□□□ -1.88
COL8A2P25067 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.33□□□□□ -1.88
COL8A2P25067 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC3.33□□□□□ -1.88
COL8A2P25067 HIGD1AP4-201ENST00000430194 280 ntBASIC3.33□□□□□ -1.88
COL8A2P25067 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.33□□□□□ -1.88
COL8A2P25067 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.33□□□□□ -1.88
COL8A2P25067 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.33□□□□□ -1.88
COL8A2P25067 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.33□□□□□ -1.88
COL8A2P25067 MTND4LP12-201ENST00000448237 295 ntBASIC3.33□□□□□ -1.88
COL8A2P25067 HMGB3P22-202ENST00000451823 572 ntBASIC3.33□□□□□ -1.88
COL8A2P25067 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.33□□□□□ -1.88
COL8A2P25067 RPS26P3-201ENST00000470205 348 ntBASIC3.33□□□□□ -1.88
COL8A2P25067 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.33□□□□□ -1.88
COL8A2P25067 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.33□□□□□ -1.88
COL8A2P25067 AC090543.2-201ENST00000483963 348 ntBASIC3.33□□□□□ -1.88
COL8A2P25067 AC004057.1-201ENST00000485827 348 ntBASIC3.33□□□□□ -1.88
COL8A2P25067 RN7SL271P-201ENST00000487601 295 ntBASIC3.33□□□□□ -1.88
COL8A2P25067 AL139099.1-201ENST00000497398 403 ntBASIC3.33□□□□□ -1.88
COL8A2P25067 SNORA67.7-201ENST00000516664 135 ntBASIC3.33□□□□□ -1.88
COL8A2P25067 NDUFA5P2-201ENST00000519723 344 ntBASIC3.33□□□□□ -1.88
COL8A2P25067 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.33□□□□□ -1.88
COL8A2P25067 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms