Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC6.62□□□□□ -1.35
LMNB1P20700 IGBP1P5-201ENST00000507524 1000 ntBASIC6.62□□□□□ -1.35
LMNB1P20700 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.62□□□□□ -1.35
LMNB1P20700 TCP11X3P-202ENST00000514289 1254 ntBASIC6.62□□□□□ -1.35
LMNB1P20700 RNY4P37-201ENST00000516225 96 ntBASIC6.62□□□□□ -1.35
LMNB1P20700 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC6.62□□□□□ -1.35
LMNB1P20700 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.62□□□□□ -1.35
LMNB1P20700 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.62□□□□□ -1.35
LMNB1P20700 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC6.62□□□□□ -1.35
LMNB1P20700 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.62□□□□□ -1.35
LMNB1P20700 OR5AK1P-201ENST00000524837 922 ntBASIC6.62□□□□□ -1.35
LMNB1P20700 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.62□□□□□ -1.35
LMNB1P20700 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
LMNB1P20700 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.62□□□□□ -1.35
LMNB1P20700 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
LMNB1P20700 TPRKBP2-201ENST00000565969 475 ntBASIC6.62□□□□□ -1.35
LMNB1P20700 AC092325.1-201ENST00000566449 554 ntBASIC6.62□□□□□ -1.35
LMNB1P20700 ANKRD36BP2-206ENST00000575193 1245 ntBASIC6.62□□□□□ -1.35
LMNB1P20700 VN1R92P-201ENST00000598511 928 ntBASIC6.62□□□□□ -1.35
LMNB1P20700 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.62□□□□□ -1.35
LMNB1P20700 AC012065.4-201ENST00000602445 679 ntBASIC6.62□□□□□ -1.35
LMNB1P20700 AL589743.7-201ENST00000612637 233 ntBASIC6.62□□□□□ -1.35
LMNB1P20700 MIR7703-201ENST00000620784 77 ntBASIC6.62□□□□□ -1.35
LMNB1P20700 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.62□□□□□ -1.35
LMNB1P20700 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LMNB1P20700 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.62□□□□□ -1.35
LMNB1P20700 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
LMNB1P20700 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
LMNB1P20700 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
LMNB1P20700 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
LMNB1P20700 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.62□□□□□ -1.35
LMNB1P20700 AC093311.1-201ENST00000506586 2021 ntBASIC6.62□□□□□ -1.35
LMNB1P20700 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
LMNB1P20700 AC133552.1-201ENST00000569988 4007 ntBASIC6.62□□□□□ -1.35
LMNB1P20700 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LMNB1P20700 AL079343.1-201ENST00000572358 1771 ntBASIC6.62□□□□□ -1.35
LMNB1P20700 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
LMNB1P20700 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
LMNB1P20700 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
LMNB1P20700 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
LMNB1P20700 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
LMNB1P20700 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.61□□□□□ -1.35
LMNB1P20700 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
LMNB1P20700 GNG5P2-201ENST00000372054 207 ntBASIC6.61□□□□□ -1.35
LMNB1P20700 AC007066.1-201ENST00000392902 381 ntBASIC6.61□□□□□ -1.35
LMNB1P20700 OR51A3P-201ENST00000413596 924 ntBASIC6.61□□□□□ -1.35
LMNB1P20700 RPL21P108-201ENST00000413857 481 ntBASIC6.61□□□□□ -1.35
LMNB1P20700 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC6.61□□□□□ -1.35
LMNB1P20700 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.61□□□□□ -1.35
LMNB1P20700 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.61□□□□□ -1.35
LMNB1P20700 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC6.61□□□□□ -1.35
LMNB1P20700 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC6.61□□□□□ -1.35
LMNB1P20700 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.61□□□□□ -1.35
LMNB1P20700 AL512286.1-201ENST00000439244 400 ntBASIC6.61□□□□□ -1.35
LMNB1P20700 TXNP5-201ENST00000441043 315 ntBASIC6.61□□□□□ -1.35
LMNB1P20700 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC6.61□□□□□ -1.35
LMNB1P20700 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.61□□□□□ -1.35
LMNB1P20700 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
LMNB1P20700 AL596266.1-201ENST00000448132 400 ntBASIC6.61□□□□□ -1.35
LMNB1P20700 NANOGNBP1-201ENST00000448444 480 ntBASIC6.61□□□□□ -1.35
LMNB1P20700 RN7SL354P-201ENST00000469282 294 ntBASIC6.61□□□□□ -1.35
LMNB1P20700 AC007537.2-201ENST00000472093 511 ntBASIC6.61□□□□□ -1.35
LMNB1P20700 RPS4XP15-201ENST00000489210 795 ntBASIC6.61□□□□□ -1.35
LMNB1P20700 AC109471.1-201ENST00000511631 612 ntBASIC6.61□□□□□ -1.35
LMNB1P20700 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC6.61□□□□□ -1.35
LMNB1P20700 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC6.61□□□□□ -1.35
LMNB1P20700 IGKV2D-10-201ENST00000520194 281 ntBASIC6.61□□□□□ -1.35
LMNB1P20700 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC6.61□□□□□ -1.35
LMNB1P20700 AP003080.1-202ENST00000526526 915 ntBASIC6.61□□□□□ -1.35
LMNB1P20700 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.61□□□□□ -1.35
LMNB1P20700 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC6.61□□□□□ -1.35
LMNB1P20700 AP002373.2-201ENST00000541631 1060 ntBASIC6.61□□□□□ -1.35
LMNB1P20700 EEF1B2P4-201ENST00000551398 348 ntBASIC6.61□□□□□ -1.35
LMNB1P20700 AL049779.3-201ENST00000557141 606 ntBASIC6.61□□□□□ -1.35
LMNB1P20700 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC6.61□□□□□ -1.35
LMNB1P20700 AC005341.1-201ENST00000571086 708 ntBASIC6.61□□□□□ -1.35
LMNB1P20700 BPTFP1-201ENST00000579209 492 ntBASIC6.61□□□□□ -1.35
LMNB1P20700 AL390838.2-201ENST00000602394 274 ntBASIC6.61□□□□□ -1.35
LMNB1P20700 AC009597.2-201ENST00000604659 592 ntBASIC6.61□□□□□ -1.35
LMNB1P20700 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
LMNB1P20700 MIR6758-201ENST00000620653 63 ntBASIC6.61□□□□□ -1.35
LMNB1P20700 AL008636.1-201ENST00000625038 1018 ntBASIC6.61□□□□□ -1.35
LMNB1P20700 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.61□□□□□ -1.35
LMNB1P20700 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
LMNB1P20700 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
LMNB1P20700 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.61□□□□□ -1.35
LMNB1P20700 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
LMNB1P20700 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
LMNB1P20700 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
LMNB1P20700 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
LMNB1P20700 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
LMNB1P20700 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.6□□□□□ -1.35
LMNB1P20700 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.6□□□□□ -1.35
LMNB1P20700 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
LMNB1P20700 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
LMNB1P20700 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
LMNB1P20700 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
LMNB1P20700 OR4G2P-201ENST00000328113 903 ntBASIC6.6□□□□□ -1.35
LMNB1P20700 SNORA62.2-201ENST00000364672 152 ntBASIC6.6□□□□□ -1.35
LMNB1P20700 RPL23AP47-201ENST00000408017 460 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms