Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DOBP13765 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 RN7SKP149-201ENST00000363008 344 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 RNU1-83P-201ENST00000363426 164 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DOBP13765 OR52E6-202ENST00000379946 954 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 AL590762.2-201ENST00000395798 571 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 EI24P3-201ENST00000399046 1062 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 SFR1P1-201ENST00000403720 688 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 AP000580.1-201ENST00000404439 358 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 AL080315.1-201ENST00000406055 466 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 RSU1P3-201ENST00000412878 835 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DOBP13765 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 MTND2P18-201ENST00000419962 1030 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 MFSD13B-201ENST00000420133 1290 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 MTCO3P21-201ENST00000430791 643 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 AC079168.2-201ENST00000453977 416 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DOBP13765 RPS5P7-201ENST00000456664 608 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 ATG12P2-201ENST00000456830 416 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 GAPDHP39-201ENST00000481866 979 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 RN7SL591P-201ENST00000496150 292 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DOBP13765 AL035404.1-201ENST00000497982 568 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 NDUFB5P1-201ENST00000508134 564 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 AC010486.3-201ENST00000511602 785 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 AL358913.1-201ENST00000554342 121 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 AC007342.5-201ENST00000571340 2142 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 AL353778.1-201ENST00000603149 408 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 AC069304.3-201ENST00000603938 1084 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 AP000255.1-201ENST00000610276 676 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 AL353726.1-201ENST00000614041 1000 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 AC131159.1-201ENST00000621854 213 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DOBP13765 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DOBP13765 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DOBP13765 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DOBP13765 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DOBP13765 AL606537.1-201ENST00000607258 2011 ntBASIC4.22□□□□□ -1.73
HLA-DOBP13765 TTC39DP-201ENST00000416781 1688 ntBASIC4.22□□□□□ -1.73
HLA-DOBP13765 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DOBP13765 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DOBP13765 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DOBP13765 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DOBP13765 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
HLA-DOBP13765 OR5H2-201ENST00000355273 945 ntBASIC4.22□□□□□ -1.73
HLA-DOBP13765 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HLA-DOBP13765 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HLA-DOBP13765 RNU6-707P-201ENST00000364647 95 ntBASIC4.22□□□□□ -1.73
HLA-DOBP13765 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DOBP13765 AL356131.1-201ENST00000405826 414 ntBASIC4.22□□□□□ -1.73
HLA-DOBP13765 AC002524.1-201ENST00000411687 547 ntBASIC4.22□□□□□ -1.73
HLA-DOBP13765 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.22□□□□□ -1.73
HLA-DOBP13765 MTCO1P3-201ENST00000429327 192 ntBASIC4.22□□□□□ -1.73
HLA-DOBP13765 GTF2IP7-202ENST00000436677 309 ntBASIC4.22□□□□□ -1.73
HLA-DOBP13765 COX7BP2-201ENST00000437976 242 ntBASIC4.22□□□□□ -1.73
HLA-DOBP13765 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DOBP13765 MRPL48P1-201ENST00000445390 636 ntBASIC4.22□□□□□ -1.73
HLA-DOBP13765 HMGB1P48-201ENST00000446155 598 ntBASIC4.22□□□□□ -1.73
HLA-DOBP13765 OR1H1P-201ENST00000448731 937 ntBASIC4.22□□□□□ -1.73
HLA-DOBP13765 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HLA-DOBP13765 ANKRD26P4-201ENST00000455755 950 ntBASIC4.22□□□□□ -1.73
HLA-DOBP13765 RPL7AP52-201ENST00000458096 790 ntBASIC4.22□□□□□ -1.73
HLA-DOBP13765 RPL23AP12-201ENST00000467573 473 ntBASIC4.22□□□□□ -1.73
HLA-DOBP13765 PRDX3P4-201ENST00000470828 747 ntBASIC4.22□□□□□ -1.73
HLA-DOBP13765 AC011979.1-201ENST00000472300 483 ntBASIC4.22□□□□□ -1.73
HLA-DOBP13765 AL161747.1-201ENST00000480068 358 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms