Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC009303.3-201ENST00000591103 736 ntBASIC6.32□□□□□ -1.4
CFTRP13569 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CFTRP13569 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CFTRP13569 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CFTRP13569 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CFTRP13569 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CFTRP13569 UBA52P6-201ENST00000399822 382 ntBASIC6.31□□□□□ -1.4
CFTRP13569 RPL21P10-201ENST00000463521 490 ntBASIC6.31□□□□□ -1.4
CFTRP13569 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC6.31□□□□□ -1.4
CFTRP13569 RN7SKP83-201ENST00000516512 178 ntBASIC6.31□□□□□ -1.4
CFTRP13569 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC6.31□□□□□ -1.4
CFTRP13569 AC006116.10-201ENST00000591836 581 ntBASIC6.31□□□□□ -1.4
CFTRP13569 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC6.31□□□□□ -1.4
CFTRP13569 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CFTRP13569 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CFTRP13569 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC6.31□□□□□ -1.4
CFTRP13569 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC6.3□□□□□ -1.4
CFTRP13569 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.3□□□□□ -1.4
CFTRP13569 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CFTRP13569 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CFTRP13569 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CFTRP13569 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CFTRP13569 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CFTRP13569 AC127537.2-201ENST00000439258 465 ntBASIC6.3□□□□□ -1.4
CFTRP13569 AL645931.1-201ENST00000439737 410 ntBASIC6.3□□□□□ -1.4
CFTRP13569 RSL24D1P3-201ENST00000449255 495 ntBASIC6.3□□□□□ -1.4
CFTRP13569 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC6.3□□□□□ -1.4
CFTRP13569 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.3□□□□□ -1.4
CFTRP13569 MIR4472-2-201ENST00000582069 67 ntBASIC6.3□□□□□ -1.4
CFTRP13569 AL390816.3-201ENST00000604527 1066 ntBASIC6.3□□□□□ -1.4
CFTRP13569 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC6.3□□□□□ -1.4
CFTRP13569 AC097504.1-201ENST00000515103 2415 ntBASIC6.3□□□□□ -1.4
CFTRP13569 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CFTRP13569 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.3□□□□□ -1.4
CFTRP13569 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.29□□□□□ -1.4
CFTRP13569 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CFTRP13569 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CFTRP13569 BMS1P3-201ENST00000372011 932 ntBASIC6.29□□□□□ -1.4
CFTRP13569 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC6.29□□□□□ -1.4
CFTRP13569 RPL7P44-201ENST00000424827 742 ntBASIC6.29□□□□□ -1.4
CFTRP13569 UBE2V1P1-201ENST00000430836 445 ntBASIC6.29□□□□□ -1.4
CFTRP13569 Z75741.1-201ENST00000446793 314 ntBASIC6.29□□□□□ -1.4
CFTRP13569 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC6.29□□□□□ -1.4
CFTRP13569 AC025518.1-201ENST00000479856 347 ntBASIC6.29□□□□□ -1.4
CFTRP13569 AC073522.1-201ENST00000483312 377 ntBASIC6.29□□□□□ -1.4
CFTRP13569 RPL7P23-201ENST00000493874 747 ntBASIC6.29□□□□□ -1.4
CFTRP13569 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.29□□□□□ -1.4
CFTRP13569 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC6.29□□□□□ -1.4
CFTRP13569 AL121890.2-201ENST00000617644 465 ntBASIC6.29□□□□□ -1.4
CFTRP13569 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CFTRP13569 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CFTRP13569 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC6.29□□□□□ -1.4
CFTRP13569 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CFTRP13569 AL121839.2-201ENST00000565058 6943 ntBASIC6.28□□□□□ -1.4
CFTRP13569 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CFTRP13569 SNORA38.1-201ENST00000364172 131 ntBASIC6.28□□□□□ -1.4
CFTRP13569 AL031121.1-201ENST00000406553 254 ntBASIC6.28□□□□□ -1.4
CFTRP13569 RN7SKP111-201ENST00000410349 271 ntBASIC6.28□□□□□ -1.4
CFTRP13569 AC087650.1-201ENST00000431445 468 ntBASIC6.28□□□□□ -1.4
CFTRP13569 AC006480.1-201ENST00000449887 378 ntBASIC6.28□□□□□ -1.4
CFTRP13569 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC6.28□□□□□ -1.4
CFTRP13569 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC6.28□□□□□ -1.4
CFTRP13569 AC008011.1-201ENST00000545989 227 ntBASIC6.28□□□□□ -1.4
CFTRP13569 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC6.28□□□□□ -1.4
CFTRP13569 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.28□□□□□ -1.4
CFTRP13569 AC069209.1-201ENST00000619282 651 ntBASIC6.28□□□□□ -1.4
CFTRP13569 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC6.28□□□□□ -1.4
CFTRP13569 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.28□□□□□ -1.4
CFTRP13569 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CFTRP13569 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CFTRP13569 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
CFTRP13569 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
CFTRP13569 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
CFTRP13569 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CFTRP13569 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CFTRP13569 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CFTRP13569 U3.26-201ENST00000391236 204 ntBASIC6.28□□□□□ -1.4
CFTRP13569 MAPRE1P3-201ENST00000435438 796 ntBASIC6.28□□□□□ -1.4
CFTRP13569 RPS3AP14-201ENST00000483907 780 ntBASIC6.28□□□□□ -1.4
CFTRP13569 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.28□□□□□ -1.4
CFTRP13569 AL133247.2-201ENST00000603236 482 ntBASIC6.28□□□□□ -1.4
CFTRP13569 MIR7851-201ENST00000610611 160 ntBASIC6.28□□□□□ -1.4
CFTRP13569 AC015722.2-201ENST00000622210 551 ntBASIC6.28□□□□□ -1.4
CFTRP13569 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CFTRP13569 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC6.27□□□□□ -1.41
CFTRP13569 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CFTRP13569 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC6.27□□□□□ -1.41
CFTRP13569 AC090337.1-201ENST00000579651 2074 ntBASIC6.27□□□□□ -1.41
CFTRP13569 RPL23AP57-201ENST00000332361 466 ntBASIC6.27□□□□□ -1.41
CFTRP13569 NPM1P37-201ENST00000403105 874 ntBASIC6.27□□□□□ -1.41
CFTRP13569 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.27□□□□□ -1.41
CFTRP13569 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.27□□□□□ -1.41
CFTRP13569 PPP1R11P1-201ENST00000486095 376 ntBASIC6.27□□□□□ -1.41
CFTRP13569 OR5M7P-201ENST00000526140 972 ntBASIC6.27□□□□□ -1.41
CFTRP13569 MIR4672-201ENST00000583126 81 ntBASIC6.27□□□□□ -1.41
CFTRP13569 MIR7154-201ENST00000620673 73 ntBASIC6.27□□□□□ -1.41
CFTRP13569 OR6C71P-202ENST00000641886 1107 ntBASIC6.27□□□□□ -1.41
CFTRP13569 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CFTRP13569 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CFTRP13569 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms