Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 IGKV2-36-201ENST00000519999 223 ntBASIC4.87□□□□□ -1.63
RB1P06400 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.87□□□□□ -1.63
RB1P06400 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.87□□□□□ -1.63
RB1P06400 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RB1P06400 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.87□□□□□ -1.63
RB1P06400 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.87□□□□□ -1.63
RB1P06400 RN7SL176P-201ENST00000580352 264 ntBASIC4.87□□□□□ -1.63
RB1P06400 AC090312.1-201ENST00000580637 348 ntBASIC4.87□□□□□ -1.63
RB1P06400 AC008507.2-201ENST00000588402 1176 ntBASIC4.87□□□□□ -1.63
RB1P06400 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.87□□□□□ -1.63
RB1P06400 AC133552.5-201ENST00000604266 540 ntBASIC4.87□□□□□ -1.63
RB1P06400 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.87□□□□□ -1.63
RB1P06400 AC245389.1-201ENST00000605141 529 ntBASIC4.87□□□□□ -1.63
RB1P06400 AC090948.2-201ENST00000607363 564 ntBASIC4.87□□□□□ -1.63
RB1P06400 AC097504.2-201ENST00000608088 454 ntBASIC4.87□□□□□ -1.63
RB1P06400 AF129408.1-201ENST00000608767 431 ntBASIC4.87□□□□□ -1.63
RB1P06400 AC116447.1-201ENST00000613153 453 ntBASIC4.87□□□□□ -1.63
RB1P06400 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.87□□□□□ -1.63
RB1P06400 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RB1P06400 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RB1P06400 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RB1P06400 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.87□□□□□ -1.63
RB1P06400 AL122126.1-201ENST00000546905 1318 ntBASIC4.87□□□□□ -1.63
RB1P06400 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
RB1P06400 AL031119.1-201ENST00000404707 1879 ntBASIC4.87□□□□□ -1.63
RB1P06400 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
RB1P06400 AL133268.1-201ENST00000405676 1401 ntBASIC4.87□□□□□ -1.63
RB1P06400 AC135352.1-201ENST00000506173 1418 ntBASIC4.87□□□□□ -1.63
RB1P06400 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RB1P06400 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RB1P06400 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RB1P06400 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RB1P06400 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RB1P06400 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
RB1P06400 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.86□□□□□ -1.63
RB1P06400 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.86□□□□□ -1.63
RB1P06400 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RB1P06400 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RB1P06400 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
RB1P06400 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.86□□□□□ -1.63
RB1P06400 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.86□□□□□ -1.63
RB1P06400 PHKBP1-201ENST00000450951 1951 ntBASIC4.86□□□□□ -1.63
RB1P06400 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RB1P06400 RNU6-1000P-201ENST00000391066 106 ntBASIC4.86□□□□□ -1.63
RB1P06400 RNA5SP317-201ENST00000410176 116 ntBASIC4.86□□□□□ -1.63
RB1P06400 RNA5SP311-201ENST00000411290 116 ntBASIC4.86□□□□□ -1.63
RB1P06400 RNU6-603P-201ENST00000411403 107 ntBASIC4.86□□□□□ -1.63
RB1P06400 UBE2V1P9-201ENST00000414760 368 ntBASIC4.86□□□□□ -1.63
RB1P06400 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.86□□□□□ -1.63
RB1P06400 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.86□□□□□ -1.63
RB1P06400 AC241520.1-201ENST00000422654 1099 ntBASIC4.86□□□□□ -1.63
RB1P06400 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
RB1P06400 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.86□□□□□ -1.63
RB1P06400 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RB1P06400 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.86□□□□□ -1.63
RB1P06400 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.86□□□□□ -1.63
RB1P06400 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.86□□□□□ -1.63
RB1P06400 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.86□□□□□ -1.63
RB1P06400 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.86□□□□□ -1.63
RB1P06400 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.86□□□□□ -1.63
RB1P06400 SAP18P1-201ENST00000512058 390 ntBASIC4.86□□□□□ -1.63
RB1P06400 MTATP6P9-201ENST00000515039 680 ntBASIC4.86□□□□□ -1.63
RB1P06400 RNA5SP315-201ENST00000516340 116 ntBASIC4.86□□□□□ -1.63
RB1P06400 RNA5SP312-201ENST00000517068 116 ntBASIC4.86□□□□□ -1.63
RB1P06400 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.86□□□□□ -1.63
RB1P06400 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.86□□□□□ -1.63
RB1P06400 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.86□□□□□ -1.63
RB1P06400 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.86□□□□□ -1.63
RB1P06400 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.86□□□□□ -1.63
RB1P06400 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.86□□□□□ -1.63
RB1P06400 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.86□□□□□ -1.63
RB1P06400 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RB1P06400 MIR4789-201ENST00000577469 82 ntBASIC4.86□□□□□ -1.63
RB1P06400 BNIP3P39-201ENST00000601077 554 ntBASIC4.86□□□□□ -1.63
RB1P06400 AL591034.3-201ENST00000605511 685 ntBASIC4.86□□□□□ -1.63
RB1P06400 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RB1P06400 AC006065.6-201ENST00000625201 545 ntBASIC4.86□□□□□ -1.63
RB1P06400 AC006927.2-201ENST00000639256 389 ntBASIC4.86□□□□□ -1.63
RB1P06400 AL445437.1-201ENST00000623157 3087 ntBASIC4.86□□□□□ -1.63
RB1P06400 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.86□□□□□ -1.63
RB1P06400 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RB1P06400 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RB1P06400 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RB1P06400 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RB1P06400 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RB1P06400 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RB1P06400 MAPK10-304ENST00000641341 3984 ntBASIC4.86□□□□□ -1.63
RB1P06400 AC073136.1-201ENST00000449426 2884 ntBASIC4.86□□□□□ -1.63
RB1P06400 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RB1P06400 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.86□□□□□ -1.63
RB1P06400 EIF2AP4-201ENST00000424793 1781 ntBASIC4.86□□□□□ -1.63
RB1P06400 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.86□□□□□ -1.63
RB1P06400 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RB1P06400 AC009229.4-201ENST00000623854 1947 ntBASIC4.85□□□□□ -1.63
RB1P06400 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.85□□□□□ -1.63
RB1P06400 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RB1P06400 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RB1P06400 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.85□□□□□ -1.63
RB1P06400 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
RB1P06400 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms