Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC098824.1-201ENST00000453565 980 ntBASIC3.85□□□□□ -1.79
HLA-DQB2P05538 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.85□□□□□ -1.79
HLA-DQB2P05538 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.85□□□□□ -1.79
HLA-DQB2P05538 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.85□□□□□ -1.79
HLA-DQB2P05538 RPL23AP71-201ENST00000470966 469 ntBASIC3.85□□□□□ -1.79
HLA-DQB2P05538 AC108941.1-201ENST00000502853 530 ntBASIC3.85□□□□□ -1.79
HLA-DQB2P05538 AC004069.2-201ENST00000505438 1114 ntBASIC3.85□□□□□ -1.79
HLA-DQB2P05538 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.85□□□□□ -1.79
HLA-DQB2P05538 BTF3L4P4-201ENST00000506381 449 ntBASIC3.85□□□□□ -1.79
HLA-DQB2P05538 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.85□□□□□ -1.79
HLA-DQB2P05538 CYCSP30-201ENST00000546447 172 ntBASIC3.85□□□□□ -1.79
HLA-DQB2P05538 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.85□□□□□ -1.79
HLA-DQB2P05538 AC084824.1-201ENST00000550917 1005 ntBASIC3.85□□□□□ -1.79
HLA-DQB2P05538 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.85□□□□□ -1.79
HLA-DQB2P05538 AC022916.3-201ENST00000592961 742 ntBASIC3.85□□□□□ -1.79
HLA-DQB2P05538 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DQB2P05538 EIF1P6-201ENST00000600054 334 ntBASIC3.85□□□□□ -1.79
HLA-DQB2P05538 BRDTP1-201ENST00000605735 677 ntBASIC3.85□□□□□ -1.79
HLA-DQB2P05538 AL354760.1-201ENST00000608357 643 ntBASIC3.85□□□□□ -1.79
HLA-DQB2P05538 AC099676.1-201ENST00000608886 657 ntBASIC3.85□□□□□ -1.79
HLA-DQB2P05538 MIR486-1-201ENST00000612171 68 ntBASIC3.85□□□□□ -1.79
HLA-DQB2P05538 AC067931.1-201ENST00000624190 671 ntBASIC3.85□□□□□ -1.79
HLA-DQB2P05538 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DQB2P05538 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DQB2P05538 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.85□□□□□ -1.79
HLA-DQB2P05538 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HLA-DQB2P05538 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.84□□□□□ -1.79
HLA-DQB2P05538 MIR1193-201ENST00000408109 78 ntBASIC3.84□□□□□ -1.79
HLA-DQB2P05538 SNORA3.3-201ENST00000408712 125 ntBASIC3.84□□□□□ -1.79
HLA-DQB2P05538 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.84□□□□□ -1.79
HLA-DQB2P05538 OR4F13P-201ENST00000428478 931 ntBASIC3.84□□□□□ -1.79
HLA-DQB2P05538 GAPDHP36-201ENST00000480688 918 ntBASIC3.84□□□□□ -1.79
HLA-DQB2P05538 AC016687.1-201ENST00000482574 353 ntBASIC3.84□□□□□ -1.79
HLA-DQB2P05538 AC093267.1-201ENST00000489176 961 ntBASIC3.84□□□□□ -1.79
HLA-DQB2P05538 AL139099.1-201ENST00000497398 403 ntBASIC3.84□□□□□ -1.79
HLA-DQB2P05538 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.84□□□□□ -1.79
HLA-DQB2P05538 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.84□□□□□ -1.79
HLA-DQB2P05538 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.84□□□□□ -1.79
HLA-DQB2P05538 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.84□□□□□ -1.79
HLA-DQB2P05538 SUMO2P20-201ENST00000520803 283 ntBASIC3.84□□□□□ -1.79
HLA-DQB2P05538 TOMM20P2-201ENST00000540082 421 ntBASIC3.84□□□□□ -1.79
HLA-DQB2P05538 PDCD5P1-201ENST00000543528 309 ntBASIC3.84□□□□□ -1.79
HLA-DQB2P05538 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.84□□□□□ -1.79
HLA-DQB2P05538 CD24P2-201ENST00000565486 219 ntBASIC3.84□□□□□ -1.79
HLA-DQB2P05538 AC122134.1-201ENST00000565664 1104 ntBASIC3.84□□□□□ -1.79
HLA-DQB2P05538 AL360157.1-201ENST00000565962 87 ntBASIC3.84□□□□□ -1.79
HLA-DQB2P05538 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.84□□□□□ -1.79
HLA-DQB2P05538 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.84□□□□□ -1.79
HLA-DQB2P05538 AC024941.1-201ENST00000612250 334 ntBASIC3.84□□□□□ -1.79
HLA-DQB2P05538 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.84□□□□□ -1.79
HLA-DQB2P05538 AP002967.1-201ENST00000624203 539 ntBASIC3.84□□□□□ -1.79
HLA-DQB2P05538 OR5AC4P-202ENST00000642086 985 ntBASIC3.84□□□□□ -1.79
HLA-DQB2P05538 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.84□□□□□ -1.79
HLA-DQB2P05538 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
HLA-DQB2P05538 RLIMP2-201ENST00000427891 1563 ntBASIC3.84□□□□□ -1.8
HLA-DQB2P05538 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
HLA-DQB2P05538 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 RN7SKP280-201ENST00000364196 304 ntBASIC3.83□□□□□ -1.8
HLA-DQB2P05538 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 AL139247.1-201ENST00000422768 325 ntBASIC3.83□□□□□ -1.8
HLA-DQB2P05538 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.83□□□□□ -1.8
HLA-DQB2P05538 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 UBDP1-202ENST00000457888 382 ntBASIC3.83□□□□□ -1.8
HLA-DQB2P05538 TRBV8-1-201ENST00000481590 279 ntBASIC3.83□□□□□ -1.8
HLA-DQB2P05538 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 UBA52P3-201ENST00000491303 382 ntBASIC3.83□□□□□ -1.8
HLA-DQB2P05538 RPS6P4-201ENST00000494693 758 ntBASIC3.83□□□□□ -1.8
HLA-DQB2P05538 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 AC093853.1-201ENST00000515689 483 ntBASIC3.83□□□□□ -1.8
HLA-DQB2P05538 RNA5SP164-201ENST00000516533 110 ntBASIC3.83□□□□□ -1.8
HLA-DQB2P05538 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 HMGB3P26-201ENST00000560051 582 ntBASIC3.83□□□□□ -1.8
HLA-DQB2P05538 HSPE1P5-201ENST00000561489 272 ntBASIC3.83□□□□□ -1.8
HLA-DQB2P05538 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 AL133247.2-201ENST00000603236 482 ntBASIC3.83□□□□□ -1.8
HLA-DQB2P05538 AC239803.2-201ENST00000610161 430 ntBASIC3.83□□□□□ -1.8
HLA-DQB2P05538 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 AC005344.1-201ENST00000613391 459 ntBASIC3.83□□□□□ -1.8
HLA-DQB2P05538 AL731566.2-201ENST00000618971 317 ntBASIC3.83□□□□□ -1.8
HLA-DQB2P05538 RMST_9.1-201ENST00000619945 193 ntBASIC3.83□□□□□ -1.8
HLA-DQB2P05538 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 AC093535.2-201ENST00000624769 2326 ntBASIC3.83□□□□□ -1.8
HLA-DQB2P05538 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.83□□□□□ -1.8
HLA-DQB2P05538 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 248.8 ms