Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
APOBP04114 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.29□□□□□ -2.04
APOBP04114 NDUFB1P1-201ENST00000435191 180 ntBASIC2.29□□□□□ -2.04
APOBP04114 CYCSP35-201ENST00000451978 304 ntBASIC2.29□□□□□ -2.04
APOBP04114 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC2.29□□□□□ -2.04
APOBP04114 AL390838.2-201ENST00000602394 274 ntBASIC2.29□□□□□ -2.04
APOBP04114 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.29□□□□□ -2.04
APOBP04114 AL390816.3-201ENST00000604527 1066 ntBASIC2.29□□□□□ -2.04
APOBP04114 AL713922.2-201ENST00000619384 716 ntBASIC2.29□□□□□ -2.04
APOBP04114 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
APOBP04114 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
APOBP04114 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
APOBP04114 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
APOBP04114 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
APOBP04114 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
APOBP04114 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC2.28□□□□□ -2.04
APOBP04114 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
APOBP04114 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
APOBP04114 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
APOBP04114 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
APOBP04114 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
APOBP04114 AC020656.2-201ENST00000613291 5309 ntBASIC2.28□□□□□ -2.04
APOBP04114 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC2.28□□□□□ -2.04
APOBP04114 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
APOBP04114 AC093698.1-201ENST00000423843 571 ntBASIC2.28□□□□□ -2.04
APOBP04114 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC2.28□□□□□ -2.04
APOBP04114 AC093663.1-201ENST00000497190 394 ntBASIC2.28□□□□□ -2.04
APOBP04114 AC008802.1-201ENST00000519121 791 ntBASIC2.28□□□□□ -2.04
APOBP04114 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.28□□□□□ -2.04
APOBP04114 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC2.28□□□□□ -2.04
APOBP04114 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.28□□□□□ -2.04
APOBP04114 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.28□□□□□ -2.04
APOBP04114 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC2.28□□□□□ -2.04
APOBP04114 BTBD10P1-201ENST00000549824 1352 ntBASIC2.28□□□□□ -2.04
APOBP04114 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
APOBP04114 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC2.28□□□□□ -2.04
APOBP04114 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
APOBP04114 AC004656.1-201ENST00000568479 4951 ntBASIC2.28□□□□□ -2.04
APOBP04114 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
APOBP04114 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
APOBP04114 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
APOBP04114 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
APOBP04114 SNORA44-201ENST00000384584 132 ntBASIC2.28□□□□□ -2.04
APOBP04114 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
APOBP04114 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC2.28□□□□□ -2.04
APOBP04114 MIR3162-201ENST00000581818 82 ntBASIC2.28□□□□□ -2.04
APOBP04114 AC008759.1-201ENST00000589783 983 ntBASIC2.28□□□□□ -2.04
APOBP04114 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.28□□□□□ -2.04
APOBP04114 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
APOBP04114 AC090337.1-201ENST00000579651 2074 ntBASIC2.28□□□□□ -2.04
APOBP04114 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
APOBP04114 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
APOBP04114 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
APOBP04114 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
APOBP04114 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
APOBP04114 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
APOBP04114 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
APOBP04114 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
APOBP04114 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.28□□□□□ -2.04
APOBP04114 RPL23AP25-201ENST00000430973 463 ntBASIC2.28□□□□□ -2.04
APOBP04114 EIF4A1P11-201ENST00000451239 222 ntBASIC2.28□□□□□ -2.04
APOBP04114 PTGES3P3-201ENST00000511479 482 ntBASIC2.28□□□□□ -2.04
APOBP04114 IGKV2-26-201ENST00000518305 343 ntBASIC2.28□□□□□ -2.04
APOBP04114 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.28□□□□□ -2.04
APOBP04114 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
APOBP04114 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
APOBP04114 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
APOBP04114 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
APOBP04114 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC2.28□□□□□ -2.05
APOBP04114 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
APOBP04114 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
APOBP04114 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
APOBP04114 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
APOBP04114 AL671855.1-201ENST00000446875 1203 ntBASIC2.27□□□□□ -2.05
APOBP04114 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC2.27□□□□□ -2.05
APOBP04114 RNA5SP341-201ENST00000516261 117 ntBASIC2.27□□□□□ -2.05
APOBP04114 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC2.27□□□□□ -2.05
APOBP04114 AC128687.2-201ENST00000609657 566 ntBASIC2.27□□□□□ -2.05
APOBP04114 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
APOBP04114 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
APOBP04114 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
APOBP04114 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
APOBP04114 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
APOBP04114 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
APOBP04114 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC2.27□□□□□ -2.05
APOBP04114 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.27□□□□□ -2.05
APOBP04114 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.27□□□□□ -2.05
APOBP04114 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.27□□□□□ -2.05
APOBP04114 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.27□□□□□ -2.05
APOBP04114 AC010374.2-201ENST00000512933 535 ntBASIC2.27□□□□□ -2.05
APOBP04114 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.27□□□□□ -2.05
APOBP04114 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.27□□□□□ -2.05
APOBP04114 AC092868.3-201ENST00000560515 784 ntBASIC2.27□□□□□ -2.05
APOBP04114 AC009303.3-201ENST00000591103 736 ntBASIC2.27□□□□□ -2.05
APOBP04114 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
APOBP04114 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.27□□□□□ -2.05
APOBP04114 AC068254.2-201ENST00000623938 3577 ntBASIC2.27□□□□□ -2.05
APOBP04114 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.27□□□□□ -2.05
APOBP04114 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
APOBP04114 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms